Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2555 | 7888;7889;7890 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
N2AB | 2555 | 7888;7889;7890 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
N2A | 2555 | 7888;7889;7890 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
N2B | 2509 | 7750;7751;7752 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
Novex-1 | 2509 | 7750;7751;7752 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
Novex-2 | 2509 | 7750;7751;7752 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
Novex-3 | 2555 | 7888;7889;7890 | chr2:178773301;178773300;178773299 | chr2:179638028;179638027;179638026 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | D | 0.471 | 0.455 | 0.389439708392 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4977 | ambiguous | 0.456 | ambiguous | -1.116 | Destabilizing | 0.999 | D | 0.626 | neutral | D | 0.600665588 | None | None | N |
E/C | 0.9644 | likely_pathogenic | 0.9633 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/D | 0.7544 | likely_pathogenic | 0.7 | pathogenic | -1.402 | Destabilizing | 0.999 | D | 0.429 | neutral | D | 0.600800251 | None | None | N |
E/F | 0.952 | likely_pathogenic | 0.9425 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/G | 0.7815 | likely_pathogenic | 0.7428 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.746 | deleterious | D | 0.682445765 | None | None | N |
E/H | 0.8898 | likely_pathogenic | 0.8756 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/I | 0.6988 | likely_pathogenic | 0.661 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/K | 0.6756 | likely_pathogenic | 0.6246 | pathogenic | -1.009 | Destabilizing | 0.999 | D | 0.471 | neutral | D | 0.530483018 | None | None | N |
E/L | 0.8147 | likely_pathogenic | 0.7875 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/M | 0.7764 | likely_pathogenic | 0.7513 | pathogenic | 0.576 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/N | 0.8463 | likely_pathogenic | 0.8047 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/P | 0.9917 | likely_pathogenic | 0.9933 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/Q | 0.3695 | ambiguous | 0.3446 | ambiguous | -1.245 | Destabilizing | 1.0 | D | 0.574 | neutral | N | 0.50574142 | None | None | N |
E/R | 0.7998 | likely_pathogenic | 0.7783 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/S | 0.6777 | likely_pathogenic | 0.6252 | pathogenic | -1.911 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | N |
E/T | 0.6546 | likely_pathogenic | 0.6127 | pathogenic | -1.556 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/V | 0.5131 | ambiguous | 0.4678 | ambiguous | -0.341 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.561551833 | None | None | N |
E/W | 0.9899 | likely_pathogenic | 0.9891 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/Y | 0.9346 | likely_pathogenic | 0.927 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.