Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25557 | 76894;76895;76896 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
N2AB | 23916 | 71971;71972;71973 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
N2A | 22989 | 69190;69191;69192 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
N2B | 16492 | 49699;49700;49701 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
Novex-1 | 16617 | 50074;50075;50076 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
Novex-2 | 16684 | 50275;50276;50277 | chr2:178569463;178569462;178569461 | chr2:179434190;179434189;179434188 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs758441370 | -1.942 | 0.822 | N | 0.497 | 0.466 | 0.723066985631 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.91E-06 | 0 |
I/T | rs758441370 | -1.942 | 0.822 | N | 0.497 | 0.466 | 0.723066985631 | gnomAD-4.0.0 | 3.42287E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69952E-06 | 2.32035E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4397 | ambiguous | 0.5054 | ambiguous | -1.714 | Destabilizing | 0.86 | D | 0.505 | neutral | None | None | None | None | N |
I/C | 0.8386 | likely_pathogenic | 0.8631 | pathogenic | -1.126 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
I/D | 0.954 | likely_pathogenic | 0.9632 | pathogenic | -1.168 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | N |
I/E | 0.8203 | likely_pathogenic | 0.8409 | pathogenic | -1.118 | Destabilizing | 0.978 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/F | 0.3304 | likely_benign | 0.3497 | ambiguous | -1.118 | Destabilizing | 0.698 | D | 0.415 | neutral | N | 0.490465723 | None | None | N |
I/G | 0.8852 | likely_pathogenic | 0.9135 | pathogenic | -2.077 | Highly Destabilizing | 0.978 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/H | 0.8169 | likely_pathogenic | 0.8375 | pathogenic | -1.18 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/K | 0.5992 | likely_pathogenic | 0.6273 | pathogenic | -1.219 | Destabilizing | 0.978 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/L | 0.1929 | likely_benign | 0.2053 | benign | -0.771 | Destabilizing | 0.294 | N | 0.397 | neutral | N | 0.485110125 | None | None | N |
I/M | 0.1385 | likely_benign | 0.1417 | benign | -0.685 | Destabilizing | 0.97 | D | 0.491 | neutral | N | 0.489379767 | None | None | N |
I/N | 0.6956 | likely_pathogenic | 0.7279 | pathogenic | -1.162 | Destabilizing | 0.97 | D | 0.725 | prob.delet. | D | 0.547010668 | None | None | N |
I/P | 0.918 | likely_pathogenic | 0.9429 | pathogenic | -1.055 | Destabilizing | 0.993 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/Q | 0.6881 | likely_pathogenic | 0.7211 | pathogenic | -1.255 | Destabilizing | 0.978 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/R | 0.5064 | ambiguous | 0.531 | ambiguous | -0.669 | Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/S | 0.5459 | ambiguous | 0.6026 | pathogenic | -1.795 | Destabilizing | 0.97 | D | 0.633 | neutral | N | 0.506750007 | None | None | N |
I/T | 0.1546 | likely_benign | 0.1833 | benign | -1.612 | Destabilizing | 0.822 | D | 0.497 | neutral | N | 0.504761771 | None | None | N |
I/V | 0.085 | likely_benign | 0.0901 | benign | -1.055 | Destabilizing | 0.058 | N | 0.186 | neutral | N | 0.498040106 | None | None | N |
I/W | 0.8945 | likely_pathogenic | 0.9096 | pathogenic | -1.213 | Destabilizing | 0.994 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/Y | 0.7963 | likely_pathogenic | 0.8202 | pathogenic | -0.981 | Destabilizing | 0.043 | N | 0.317 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.