Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25570 | 76933;76934;76935 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
N2AB | 23929 | 72010;72011;72012 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
N2A | 23002 | 69229;69230;69231 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
N2B | 16505 | 49738;49739;49740 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
Novex-1 | 16630 | 50113;50114;50115 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
Novex-2 | 16697 | 50314;50315;50316 | chr2:178569424;178569423;178569422 | chr2:179434151;179434150;179434149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.698 | N | 0.371 | 0.159 | 0.0762999501168 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43406E-05 | 0 |
N/S | None | None | 0.058 | N | 0.331 | 0.137 | 0.115124310173 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2031 | likely_benign | 0.2179 | benign | -0.418 | Destabilizing | 0.754 | D | 0.405 | neutral | None | None | None | None | N |
N/C | 0.2286 | likely_benign | 0.2528 | benign | 0.38 | Stabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | N |
N/D | 0.118 | likely_benign | 0.1218 | benign | 0.046 | Stabilizing | 0.822 | D | 0.411 | neutral | N | 0.484723227 | None | None | N |
N/E | 0.3248 | likely_benign | 0.3571 | ambiguous | -0.002 | Destabilizing | 0.754 | D | 0.37 | neutral | None | None | None | None | N |
N/F | 0.4645 | ambiguous | 0.5214 | ambiguous | -0.87 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | N |
N/G | 0.2377 | likely_benign | 0.2464 | benign | -0.564 | Destabilizing | 0.754 | D | 0.383 | neutral | None | None | None | None | N |
N/H | 0.0876 | likely_benign | 0.0982 | benign | -0.65 | Destabilizing | 0.97 | D | 0.409 | neutral | N | 0.48313212 | None | None | N |
N/I | 0.2746 | likely_benign | 0.3042 | benign | -0.12 | Destabilizing | 0.97 | D | 0.623 | neutral | N | 0.49336279 | None | None | N |
N/K | 0.2259 | likely_benign | 0.2633 | benign | 0.217 | Stabilizing | 0.698 | D | 0.371 | neutral | N | 0.48999576 | None | None | N |
N/L | 0.2766 | likely_benign | 0.3077 | benign | -0.12 | Destabilizing | 0.956 | D | 0.516 | neutral | None | None | None | None | N |
N/M | 0.3205 | likely_benign | 0.345 | ambiguous | 0.406 | Stabilizing | 0.994 | D | 0.567 | neutral | None | None | None | None | N |
N/P | 0.8115 | likely_pathogenic | 0.8221 | pathogenic | -0.194 | Destabilizing | 0.978 | D | 0.569 | neutral | None | None | None | None | N |
N/Q | 0.2588 | likely_benign | 0.2877 | benign | -0.311 | Destabilizing | 0.16 | N | 0.301 | neutral | None | None | None | None | N |
N/R | 0.257 | likely_benign | 0.2964 | benign | 0.313 | Stabilizing | 0.915 | D | 0.383 | neutral | None | None | None | None | N |
N/S | 0.083 | likely_benign | 0.0844 | benign | -0.04 | Destabilizing | 0.058 | N | 0.331 | neutral | N | 0.512987263 | None | None | N |
N/T | 0.134 | likely_benign | 0.1443 | benign | 0.051 | Stabilizing | 0.698 | D | 0.371 | neutral | N | 0.471775815 | None | None | N |
N/V | 0.253 | likely_benign | 0.2767 | benign | -0.194 | Destabilizing | 0.956 | D | 0.611 | neutral | None | None | None | None | N |
N/W | 0.7801 | likely_pathogenic | 0.8136 | pathogenic | -0.829 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
N/Y | 0.1607 | likely_benign | 0.1844 | benign | -0.559 | Destabilizing | 0.99 | D | 0.582 | neutral | N | 0.492855811 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.