Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25584 | 76975;76976;76977 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
N2AB | 23943 | 72052;72053;72054 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
N2A | 23016 | 69271;69272;69273 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
N2B | 16519 | 49780;49781;49782 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
Novex-1 | 16644 | 50155;50156;50157 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
Novex-2 | 16711 | 50356;50357;50358 | chr2:178569382;178569381;178569380 | chr2:179434109;179434108;179434107 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1217257725 | 0.372 | 0.928 | N | 0.634 | 0.347 | 0.394990421082 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1217257725 | 0.372 | 0.928 | N | 0.634 | 0.347 | 0.394990421082 | gnomAD-4.0.0 | 2.73746E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.56506E-05 | None | 0 | 0 | 8.99616E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2294 | likely_benign | 0.2471 | benign | -0.556 | Destabilizing | 0.928 | D | 0.671 | neutral | D | 0.524458704 | None | None | N |
E/C | 0.8432 | likely_pathogenic | 0.8582 | pathogenic | 0.032 | Stabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.3585 | ambiguous | 0.36 | ambiguous | -0.716 | Destabilizing | 0.039 | N | 0.284 | neutral | N | 0.495633964 | None | None | N |
E/F | 0.8727 | likely_pathogenic | 0.8873 | pathogenic | -0.638 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.3419 | ambiguous | 0.3595 | ambiguous | -0.797 | Destabilizing | 0.978 | D | 0.74 | deleterious | N | 0.503142383 | None | None | N |
E/H | 0.5585 | ambiguous | 0.5797 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/I | 0.4217 | ambiguous | 0.4373 | ambiguous | 0.058 | Stabilizing | 0.992 | D | 0.798 | deleterious | None | None | None | None | N |
E/K | 0.2056 | likely_benign | 0.2166 | benign | 0.099 | Stabilizing | 0.928 | D | 0.634 | neutral | N | 0.507449024 | None | None | N |
E/L | 0.5616 | ambiguous | 0.5933 | pathogenic | 0.058 | Stabilizing | 0.992 | D | 0.777 | deleterious | None | None | None | None | N |
E/M | 0.5177 | ambiguous | 0.5482 | ambiguous | 0.467 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
E/N | 0.4433 | ambiguous | 0.4518 | ambiguous | -0.162 | Destabilizing | 0.968 | D | 0.75 | deleterious | None | None | None | None | N |
E/P | 0.9909 | likely_pathogenic | 0.992 | pathogenic | -0.126 | Destabilizing | 0.992 | D | 0.752 | deleterious | None | None | None | None | N |
E/Q | 0.1171 | likely_benign | 0.1252 | benign | -0.145 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | N | 0.488125546 | None | None | N |
E/R | 0.3589 | ambiguous | 0.384 | ambiguous | 0.112 | Stabilizing | 0.992 | D | 0.771 | deleterious | None | None | None | None | N |
E/S | 0.2703 | likely_benign | 0.2851 | benign | -0.365 | Destabilizing | 0.944 | D | 0.673 | neutral | None | None | None | None | N |
E/T | 0.2286 | likely_benign | 0.2377 | benign | -0.17 | Destabilizing | 0.983 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/V | 0.2341 | likely_benign | 0.2441 | benign | -0.126 | Destabilizing | 0.989 | D | 0.772 | deleterious | N | 0.487809605 | None | None | N |
E/W | 0.9548 | likely_pathogenic | 0.9598 | pathogenic | -0.54 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
E/Y | 0.8157 | likely_pathogenic | 0.8343 | pathogenic | -0.398 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.