Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25592 | 76999;77000;77001 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
N2AB | 23951 | 72076;72077;72078 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
N2A | 23024 | 69295;69296;69297 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
N2B | 16527 | 49804;49805;49806 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
Novex-1 | 16652 | 50179;50180;50181 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
Novex-2 | 16719 | 50380;50381;50382 | chr2:178569358;178569357;178569356 | chr2:179434085;179434084;179434083 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.008 | D | 0.409 | 0.235 | 0.31411915649 | gnomAD-4.0.0 | 3.18432E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54816E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs1707265300 | None | 0.075 | N | 0.389 | 0.262 | 0.398283496042 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43382E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5011 | ambiguous | 0.5801 | pathogenic | -0.776 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | N |
A/D | 0.8587 | likely_pathogenic | 0.8787 | pathogenic | -0.05 | Destabilizing | 0.901 | D | 0.739 | prob.delet. | N | 0.51567723 | None | None | N |
A/E | 0.8222 | likely_pathogenic | 0.8432 | pathogenic | -0.147 | Destabilizing | 0.923 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/F | 0.5879 | likely_pathogenic | 0.6561 | pathogenic | -0.663 | Destabilizing | 0.961 | D | 0.777 | deleterious | None | None | None | None | N |
A/G | 0.2731 | likely_benign | 0.3101 | benign | -0.447 | Destabilizing | 0.565 | D | 0.577 | neutral | N | 0.494383425 | None | None | N |
A/H | 0.8674 | likely_pathogenic | 0.889 | pathogenic | -0.463 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
A/I | 0.3071 | likely_benign | 0.4008 | ambiguous | -0.134 | Destabilizing | 0.633 | D | 0.686 | prob.neutral | None | None | None | None | N |
A/K | 0.9282 | likely_pathogenic | 0.9476 | pathogenic | -0.601 | Destabilizing | 0.923 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/L | 0.3251 | likely_benign | 0.394 | ambiguous | -0.134 | Destabilizing | 0.633 | D | 0.599 | neutral | None | None | None | None | N |
A/M | 0.3601 | ambiguous | 0.4375 | ambiguous | -0.357 | Destabilizing | 0.989 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/N | 0.6963 | likely_pathogenic | 0.7419 | pathogenic | -0.319 | Destabilizing | 0.923 | D | 0.752 | deleterious | None | None | None | None | N |
A/P | 0.9754 | likely_pathogenic | 0.9805 | pathogenic | -0.155 | Destabilizing | 0.949 | D | 0.736 | prob.delet. | D | 0.546151749 | None | None | N |
A/Q | 0.7896 | likely_pathogenic | 0.8224 | pathogenic | -0.477 | Destabilizing | 0.923 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/R | 0.89 | likely_pathogenic | 0.9126 | pathogenic | -0.282 | Destabilizing | 0.923 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/S | 0.1578 | likely_benign | 0.1732 | benign | -0.645 | Destabilizing | 0.075 | N | 0.397 | neutral | N | 0.483935264 | None | None | N |
A/T | 0.1335 | likely_benign | 0.1643 | benign | -0.635 | Destabilizing | 0.008 | N | 0.409 | neutral | D | 0.536638567 | None | None | N |
A/V | 0.146 | likely_benign | 0.2019 | benign | -0.155 | Destabilizing | 0.075 | N | 0.389 | neutral | N | 0.512108269 | None | None | N |
A/W | 0.9512 | likely_pathogenic | 0.9643 | pathogenic | -0.869 | Destabilizing | 0.996 | D | 0.747 | deleterious | None | None | None | None | N |
A/Y | 0.7735 | likely_pathogenic | 0.8242 | pathogenic | -0.487 | Destabilizing | 0.987 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.