Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25603 | 77032;77033;77034 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
N2AB | 23962 | 72109;72110;72111 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
N2A | 23035 | 69328;69329;69330 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
N2B | 16538 | 49837;49838;49839 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
Novex-1 | 16663 | 50212;50213;50214 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
Novex-2 | 16730 | 50413;50414;50415 | chr2:178569325;178569324;178569323 | chr2:179434052;179434051;179434050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1446500939 | -1.307 | 0.011 | N | 0.31 | 0.097 | 0.159798565429 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/G | rs1446500939 | -1.307 | 0.011 | N | 0.31 | 0.097 | 0.159798565429 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | I | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1294 | likely_benign | 0.1416 | benign | -0.851 | Destabilizing | 0.702 | D | 0.565 | neutral | None | None | None | None | I |
S/C | 0.2191 | likely_benign | 0.2521 | benign | -0.746 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | N | 0.514226793 | None | None | I |
S/D | 0.7204 | likely_pathogenic | 0.7449 | pathogenic | -0.86 | Destabilizing | 0.034 | N | 0.392 | neutral | None | None | None | None | I |
S/E | 0.9101 | likely_pathogenic | 0.9247 | pathogenic | -0.805 | Destabilizing | 0.851 | D | 0.571 | neutral | None | None | None | None | I |
S/F | 0.6205 | likely_pathogenic | 0.6823 | pathogenic | -0.817 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | I |
S/G | 0.0758 | likely_benign | 0.0865 | benign | -1.14 | Destabilizing | 0.011 | N | 0.31 | neutral | N | 0.420469465 | None | None | I |
S/H | 0.7726 | likely_pathogenic | 0.8028 | pathogenic | -1.522 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
S/I | 0.7063 | likely_pathogenic | 0.753 | pathogenic | -0.167 | Destabilizing | 0.995 | D | 0.81 | deleterious | N | 0.502870488 | None | None | I |
S/K | 0.9789 | likely_pathogenic | 0.9833 | pathogenic | -0.74 | Destabilizing | 0.919 | D | 0.617 | neutral | None | None | None | None | I |
S/L | 0.275 | likely_benign | 0.3041 | benign | -0.167 | Destabilizing | 0.988 | D | 0.796 | deleterious | None | None | None | None | I |
S/M | 0.4893 | ambiguous | 0.5315 | ambiguous | -0.043 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | I |
S/N | 0.4193 | ambiguous | 0.4364 | ambiguous | -0.881 | Destabilizing | 0.896 | D | 0.587 | neutral | N | 0.485447342 | None | None | I |
S/P | 0.9545 | likely_pathogenic | 0.9672 | pathogenic | -0.361 | Destabilizing | 0.996 | D | 0.746 | deleterious | None | None | None | None | I |
S/Q | 0.8848 | likely_pathogenic | 0.9029 | pathogenic | -0.988 | Destabilizing | 0.988 | D | 0.628 | neutral | None | None | None | None | I |
S/R | 0.971 | likely_pathogenic | 0.9785 | pathogenic | -0.705 | Destabilizing | 0.984 | D | 0.738 | prob.delet. | N | 0.512959346 | None | None | I |
S/T | 0.3003 | likely_benign | 0.3238 | benign | -0.808 | Destabilizing | 0.946 | D | 0.579 | neutral | N | 0.494348112 | None | None | I |
S/V | 0.6708 | likely_pathogenic | 0.717 | pathogenic | -0.361 | Destabilizing | 0.988 | D | 0.788 | deleterious | None | None | None | None | I |
S/W | 0.8346 | likely_pathogenic | 0.8657 | pathogenic | -0.831 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
S/Y | 0.5998 | likely_pathogenic | 0.645 | pathogenic | -0.536 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.