Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25604 | 77035;77036;77037 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
N2AB | 23963 | 72112;72113;72114 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
N2A | 23036 | 69331;69332;69333 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
N2B | 16539 | 49840;49841;49842 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
Novex-1 | 16664 | 50215;50216;50217 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
Novex-2 | 16731 | 50416;50417;50418 | chr2:178569322;178569321;178569320 | chr2:179434049;179434048;179434047 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1707251307 | None | 0.707 | D | 0.777 | 0.404 | 0.520694202979 | gnomAD-4.0.0 | 2.0538E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.87441E-05 | 0 | 1.79963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0488 | likely_benign | 0.056 | benign | -1.696 | Destabilizing | 0.001 | N | 0.437 | neutral | N | 0.443767612 | None | None | I |
P/C | 0.353 | ambiguous | 0.4186 | ambiguous | -1.089 | Destabilizing | 0.977 | D | 0.803 | deleterious | None | None | None | None | I |
P/D | 0.6603 | likely_pathogenic | 0.7285 | pathogenic | -1.891 | Destabilizing | 0.059 | N | 0.707 | prob.neutral | None | None | None | None | I |
P/E | 0.2972 | likely_benign | 0.3656 | ambiguous | -1.883 | Destabilizing | 0.001 | N | 0.45 | neutral | None | None | None | None | I |
P/F | 0.5293 | ambiguous | 0.6104 | pathogenic | -1.322 | Destabilizing | 0.957 | D | 0.816 | deleterious | None | None | None | None | I |
P/G | 0.3042 | likely_benign | 0.3551 | ambiguous | -2.019 | Highly Destabilizing | 0.392 | N | 0.748 | deleterious | None | None | None | None | I |
P/H | 0.2449 | likely_benign | 0.3036 | benign | -1.566 | Destabilizing | 0.985 | D | 0.788 | deleterious | None | None | None | None | I |
P/I | 0.3843 | ambiguous | 0.4532 | ambiguous | -0.89 | Destabilizing | 0.918 | D | 0.809 | deleterious | None | None | None | None | I |
P/K | 0.3541 | ambiguous | 0.4587 | ambiguous | -1.348 | Destabilizing | 0.761 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/L | 0.163 | likely_benign | 0.2143 | benign | -0.89 | Destabilizing | 0.707 | D | 0.777 | deleterious | D | 0.53961243 | None | None | I |
P/M | 0.3117 | likely_benign | 0.3886 | ambiguous | -0.66 | Destabilizing | 0.33 | N | 0.615 | neutral | None | None | None | None | I |
P/N | 0.4567 | ambiguous | 0.5207 | ambiguous | -1.168 | Destabilizing | 0.736 | D | 0.781 | deleterious | None | None | None | None | I |
P/Q | 0.1571 | likely_benign | 0.2024 | benign | -1.369 | Destabilizing | 0.76 | D | 0.725 | prob.delet. | D | 0.526481698 | None | None | I |
P/R | 0.2336 | likely_benign | 0.3237 | benign | -0.807 | Destabilizing | 0.034 | N | 0.522 | neutral | N | 0.502136473 | None | None | I |
P/S | 0.1036 | likely_benign | 0.1179 | benign | -1.654 | Destabilizing | 0.402 | N | 0.681 | prob.neutral | N | 0.496603064 | None | None | I |
P/T | 0.1448 | likely_benign | 0.172 | benign | -1.55 | Destabilizing | 0.374 | N | 0.701 | prob.neutral | N | 0.509644891 | None | None | I |
P/V | 0.23 | likely_benign | 0.2909 | benign | -1.126 | Destabilizing | 0.359 | N | 0.755 | deleterious | None | None | None | None | I |
P/W | 0.7561 | likely_pathogenic | 0.833 | pathogenic | -1.543 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | I |
P/Y | 0.5076 | ambiguous | 0.5929 | pathogenic | -1.264 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.