Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2560477035;77036;77037 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
N2AB2396372112;72113;72114 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
N2A2303669331;69332;69333 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
N2B1653949840;49841;49842 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
Novex-11666450215;50216;50217 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
Novex-21673150416;50417;50418 chr2:178569322;178569321;178569320chr2:179434049;179434048;179434047
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-74
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.2561
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/L rs1707251307 None 0.707 D 0.777 0.404 0.520694202979 gnomAD-4.0.0 2.0538E-06 None None None None I None 0 0 None 0 0 None 1.87441E-05 0 1.79963E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.0488 likely_benign 0.056 benign -1.696 Destabilizing 0.001 N 0.437 neutral N 0.443767612 None None I
P/C 0.353 ambiguous 0.4186 ambiguous -1.089 Destabilizing 0.977 D 0.803 deleterious None None None None I
P/D 0.6603 likely_pathogenic 0.7285 pathogenic -1.891 Destabilizing 0.059 N 0.707 prob.neutral None None None None I
P/E 0.2972 likely_benign 0.3656 ambiguous -1.883 Destabilizing 0.001 N 0.45 neutral None None None None I
P/F 0.5293 ambiguous 0.6104 pathogenic -1.322 Destabilizing 0.957 D 0.816 deleterious None None None None I
P/G 0.3042 likely_benign 0.3551 ambiguous -2.019 Highly Destabilizing 0.392 N 0.748 deleterious None None None None I
P/H 0.2449 likely_benign 0.3036 benign -1.566 Destabilizing 0.985 D 0.788 deleterious None None None None I
P/I 0.3843 ambiguous 0.4532 ambiguous -0.89 Destabilizing 0.918 D 0.809 deleterious None None None None I
P/K 0.3541 ambiguous 0.4587 ambiguous -1.348 Destabilizing 0.761 D 0.685 prob.neutral None None None None I
P/L 0.163 likely_benign 0.2143 benign -0.89 Destabilizing 0.707 D 0.777 deleterious D 0.53961243 None None I
P/M 0.3117 likely_benign 0.3886 ambiguous -0.66 Destabilizing 0.33 N 0.615 neutral None None None None I
P/N 0.4567 ambiguous 0.5207 ambiguous -1.168 Destabilizing 0.736 D 0.781 deleterious None None None None I
P/Q 0.1571 likely_benign 0.2024 benign -1.369 Destabilizing 0.76 D 0.725 prob.delet. D 0.526481698 None None I
P/R 0.2336 likely_benign 0.3237 benign -0.807 Destabilizing 0.034 N 0.522 neutral N 0.502136473 None None I
P/S 0.1036 likely_benign 0.1179 benign -1.654 Destabilizing 0.402 N 0.681 prob.neutral N 0.496603064 None None I
P/T 0.1448 likely_benign 0.172 benign -1.55 Destabilizing 0.374 N 0.701 prob.neutral N 0.509644891 None None I
P/V 0.23 likely_benign 0.2909 benign -1.126 Destabilizing 0.359 N 0.755 deleterious None None None None I
P/W 0.7561 likely_pathogenic 0.833 pathogenic -1.543 Destabilizing 0.998 D 0.812 deleterious None None None None I
P/Y 0.5076 ambiguous 0.5929 pathogenic -1.264 Destabilizing 0.993 D 0.819 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.