Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25605 | 77038;77039;77040 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
N2AB | 23964 | 72115;72116;72117 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
N2A | 23037 | 69334;69335;69336 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
N2B | 16540 | 49843;49844;49845 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
Novex-1 | 16665 | 50218;50219;50220 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
Novex-2 | 16732 | 50419;50420;50421 | chr2:178569319;178569318;178569317 | chr2:179434046;179434045;179434044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1471696934 | -2.555 | 0.909 | D | 0.773 | 0.664 | 0.51759925163 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1471696934 | -2.555 | 0.909 | D | 0.773 | 0.664 | 0.51759925163 | gnomAD-4.0.0 | 1.59343E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4197 | ambiguous | 0.4375 | ambiguous | -2.185 | Highly Destabilizing | 0.909 | D | 0.773 | deleterious | D | 0.605102788 | None | None | N |
P/C | 0.7806 | likely_pathogenic | 0.7679 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -3.265 | Highly Destabilizing | 0.897 | D | 0.818 | deleterious | None | None | None | None | N |
P/E | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -3.051 | Highly Destabilizing | 0.933 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.9977 | likely_pathogenic | 0.9979 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/G | 0.9794 | likely_pathogenic | 0.9804 | pathogenic | -2.675 | Highly Destabilizing | 0.97 | D | 0.849 | deleterious | None | None | None | None | N |
P/H | 0.9961 | likely_pathogenic | 0.9962 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.661427717 | None | None | N |
P/I | 0.7121 | likely_pathogenic | 0.7361 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/K | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/L | 0.7708 | likely_pathogenic | 0.7964 | pathogenic | -0.801 | Destabilizing | 0.882 | D | 0.774 | deleterious | D | 0.661024108 | None | None | N |
P/M | 0.9466 | likely_pathogenic | 0.9496 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/N | 0.9966 | likely_pathogenic | 0.9965 | pathogenic | -2.211 | Highly Destabilizing | 0.965 | D | 0.861 | deleterious | None | None | None | None | N |
P/Q | 0.9924 | likely_pathogenic | 0.9927 | pathogenic | -2.036 | Highly Destabilizing | 0.994 | D | 0.797 | deleterious | None | None | None | None | N |
P/R | 0.9948 | likely_pathogenic | 0.9951 | pathogenic | -1.645 | Destabilizing | 0.997 | D | 0.857 | deleterious | D | 0.661225913 | None | None | N |
P/S | 0.9245 | likely_pathogenic | 0.9267 | pathogenic | -2.694 | Highly Destabilizing | 0.679 | D | 0.709 | prob.delet. | D | 0.644772583 | None | None | N |
P/T | 0.7398 | likely_pathogenic | 0.7448 | pathogenic | -2.363 | Highly Destabilizing | 0.938 | D | 0.815 | deleterious | D | 0.661225913 | None | None | N |
P/V | 0.3691 | ambiguous | 0.3946 | ambiguous | -1.24 | Destabilizing | 0.992 | D | 0.847 | deleterious | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.685 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/Y | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.