Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25609 | 77050;77051;77052 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
N2AB | 23968 | 72127;72128;72129 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
N2A | 23041 | 69346;69347;69348 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
N2B | 16544 | 49855;49856;49857 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
Novex-1 | 16669 | 50230;50231;50232 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
Novex-2 | 16736 | 50431;50432;50433 | chr2:178569307;178569306;178569305 | chr2:179434034;179434033;179434032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | None | N | 0.193 | 0.067 | 0.162503812791 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2049 | likely_benign | 0.2436 | benign | -0.308 | Destabilizing | 0.116 | N | 0.454 | neutral | None | None | None | None | N |
K/C | 0.3831 | ambiguous | 0.4591 | ambiguous | -0.417 | Destabilizing | 0.981 | D | 0.556 | neutral | None | None | None | None | N |
K/D | 0.4801 | ambiguous | 0.5483 | ambiguous | 0.092 | Stabilizing | 0.242 | N | 0.511 | neutral | None | None | None | None | N |
K/E | 0.1483 | likely_benign | 0.1719 | benign | 0.148 | Stabilizing | None | N | 0.271 | neutral | N | 0.462724306 | None | None | N |
K/F | 0.5309 | ambiguous | 0.6244 | pathogenic | -0.258 | Destabilizing | 0.471 | N | 0.573 | neutral | None | None | None | None | N |
K/G | 0.3749 | ambiguous | 0.4433 | ambiguous | -0.604 | Destabilizing | 0.39 | N | 0.556 | neutral | None | None | None | None | N |
K/H | 0.1649 | likely_benign | 0.1843 | benign | -0.975 | Destabilizing | 0.653 | D | 0.573 | neutral | None | None | None | None | N |
K/I | 0.187 | likely_benign | 0.2262 | benign | 0.422 | Stabilizing | 0.007 | N | 0.584 | neutral | N | 0.47300508 | None | None | N |
K/L | 0.2113 | likely_benign | 0.2552 | benign | 0.422 | Stabilizing | None | N | 0.405 | neutral | None | None | None | None | N |
K/M | 0.1445 | likely_benign | 0.1665 | benign | 0.312 | Stabilizing | 0.007 | N | 0.383 | neutral | None | None | None | None | N |
K/N | 0.276 | likely_benign | 0.3153 | benign | -0.124 | Destabilizing | 0.325 | N | 0.493 | neutral | N | 0.477929378 | None | None | N |
K/P | 0.8871 | likely_pathogenic | 0.9219 | pathogenic | 0.21 | Stabilizing | 0.819 | D | 0.618 | neutral | None | None | None | None | N |
K/Q | 0.0911 | likely_benign | 0.0975 | benign | -0.284 | Destabilizing | 0.028 | N | 0.481 | neutral | N | 0.463377667 | None | None | N |
K/R | 0.0727 | likely_benign | 0.0758 | benign | -0.356 | Destabilizing | None | N | 0.193 | neutral | N | 0.447850855 | None | None | N |
K/S | 0.2537 | likely_benign | 0.2933 | benign | -0.752 | Destabilizing | 0.116 | N | 0.431 | neutral | None | None | None | None | N |
K/T | 0.0963 | likely_benign | 0.1051 | benign | -0.512 | Destabilizing | 0.002 | N | 0.373 | neutral | N | 0.42893702 | None | None | N |
K/V | 0.1693 | likely_benign | 0.2032 | benign | 0.21 | Stabilizing | 0.005 | N | 0.483 | neutral | None | None | None | None | N |
K/W | 0.5688 | likely_pathogenic | 0.6593 | pathogenic | -0.154 | Destabilizing | 0.987 | D | 0.59 | neutral | None | None | None | None | N |
K/Y | 0.4471 | ambiguous | 0.5301 | ambiguous | 0.165 | Stabilizing | 0.392 | N | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.