Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25615 | 77068;77069;77070 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
N2AB | 23974 | 72145;72146;72147 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
N2A | 23047 | 69364;69365;69366 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
N2B | 16550 | 49873;49874;49875 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
Novex-1 | 16675 | 50248;50249;50250 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
Novex-2 | 16742 | 50449;50450;50451 | chr2:178569289;178569288;178569287 | chr2:179434016;179434015;179434014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1707237309 | None | 0.996 | N | 0.567 | 0.234 | 0.280181792013 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1707237309 | None | 0.996 | N | 0.567 | 0.234 | 0.280181792013 | gnomAD-4.0.0 | 2.57242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.8058E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4717 | ambiguous | 0.523 | ambiguous | -0.146 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
K/C | 0.7987 | likely_pathogenic | 0.8354 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.8338 | likely_pathogenic | 0.8648 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/E | 0.4051 | ambiguous | 0.4379 | ambiguous | -0.015 | Destabilizing | 0.997 | D | 0.636 | neutral | N | 0.466009506 | None | None | N |
K/F | 0.9384 | likely_pathogenic | 0.9592 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/G | 0.5726 | likely_pathogenic | 0.6322 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/H | 0.4942 | ambiguous | 0.5558 | ambiguous | -0.764 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
K/I | 0.709 | likely_pathogenic | 0.7536 | pathogenic | 0.381 | Stabilizing | 0.992 | D | 0.677 | prob.neutral | N | 0.518706564 | None | None | N |
K/L | 0.6347 | likely_pathogenic | 0.7063 | pathogenic | 0.381 | Stabilizing | 0.994 | D | 0.643 | neutral | None | None | None | None | N |
K/M | 0.4974 | ambiguous | 0.5582 | ambiguous | 0.411 | Stabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
K/N | 0.6755 | likely_pathogenic | 0.7269 | pathogenic | 0.185 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.478824296 | None | None | N |
K/P | 0.7737 | likely_pathogenic | 0.8317 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/Q | 0.2415 | likely_benign | 0.2707 | benign | -0.091 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | N | 0.473254889 | None | None | N |
K/R | 0.0699 | likely_benign | 0.0747 | benign | -0.04 | Destabilizing | 0.996 | D | 0.567 | neutral | N | 0.472189152 | None | None | N |
K/S | 0.5995 | likely_pathogenic | 0.6545 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/T | 0.3881 | ambiguous | 0.4579 | ambiguous | -0.218 | Destabilizing | 0.999 | D | 0.668 | neutral | N | 0.479620764 | None | None | N |
K/V | 0.5899 | likely_pathogenic | 0.6459 | pathogenic | 0.234 | Stabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | N |
K/W | 0.887 | likely_pathogenic | 0.9219 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/Y | 0.8482 | likely_pathogenic | 0.8906 | pathogenic | 0.076 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.