Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25616 | 77071;77072;77073 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
N2AB | 23975 | 72148;72149;72150 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
N2A | 23048 | 69367;69368;69369 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
N2B | 16551 | 49876;49877;49878 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
Novex-1 | 16676 | 50251;50252;50253 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
Novex-2 | 16743 | 50452;50453;50454 | chr2:178569286;178569285;178569284 | chr2:179434013;179434012;179434011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.006 | N | 0.133 | 0.077 | 0.151104730317 | gnomAD-4.0.0 | 1.59988E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87379E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1702 | likely_benign | 0.2033 | benign | -0.46 | Destabilizing | 0.822 | D | 0.488 | neutral | N | 0.487462031 | None | None | N |
D/C | 0.5604 | ambiguous | 0.612 | pathogenic | -0.037 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/E | 0.1152 | likely_benign | 0.1332 | benign | -0.769 | Destabilizing | 0.656 | D | 0.465 | neutral | N | 0.464705819 | None | None | N |
D/F | 0.5195 | ambiguous | 0.5679 | pathogenic | -0.643 | Destabilizing | 0.993 | D | 0.637 | neutral | None | None | None | None | N |
D/G | 0.1503 | likely_benign | 0.1669 | benign | -0.719 | Destabilizing | 0.698 | D | 0.433 | neutral | N | 0.504474928 | None | None | N |
D/H | 0.2883 | likely_benign | 0.3221 | benign | -0.95 | Destabilizing | 0.97 | D | 0.515 | neutral | N | 0.477422399 | None | None | N |
D/I | 0.4152 | ambiguous | 0.4747 | ambiguous | 0.192 | Stabilizing | 0.978 | D | 0.621 | neutral | None | None | None | None | N |
D/K | 0.4137 | ambiguous | 0.4648 | ambiguous | -0.118 | Destabilizing | 0.86 | D | 0.489 | neutral | None | None | None | None | N |
D/L | 0.3752 | ambiguous | 0.4326 | ambiguous | 0.192 | Stabilizing | 0.978 | D | 0.615 | neutral | None | None | None | None | N |
D/M | 0.513 | ambiguous | 0.5787 | pathogenic | 0.658 | Stabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
D/N | 0.0787 | likely_benign | 0.0898 | benign | -0.375 | Destabilizing | 0.006 | N | 0.133 | neutral | N | 0.464241672 | None | None | N |
D/P | 0.9361 | likely_pathogenic | 0.9443 | pathogenic | -0.002 | Destabilizing | 0.993 | D | 0.503 | neutral | None | None | None | None | N |
D/Q | 0.2969 | likely_benign | 0.3456 | ambiguous | -0.344 | Destabilizing | 0.956 | D | 0.49 | neutral | None | None | None | None | N |
D/R | 0.499 | ambiguous | 0.5443 | ambiguous | -0.147 | Destabilizing | 0.956 | D | 0.569 | neutral | None | None | None | None | N |
D/S | 0.1062 | likely_benign | 0.1275 | benign | -0.562 | Destabilizing | 0.754 | D | 0.424 | neutral | None | None | None | None | N |
D/T | 0.1518 | likely_benign | 0.188 | benign | -0.357 | Destabilizing | 0.86 | D | 0.485 | neutral | None | None | None | None | N |
D/V | 0.2539 | likely_benign | 0.2956 | benign | -0.002 | Destabilizing | 0.97 | D | 0.617 | neutral | N | 0.517176081 | None | None | N |
D/W | 0.8745 | likely_pathogenic | 0.8917 | pathogenic | -0.604 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/Y | 0.2235 | likely_benign | 0.2416 | benign | -0.426 | Destabilizing | 0.99 | D | 0.637 | neutral | N | 0.516922592 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.