Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25617 | 77074;77075;77076 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
N2AB | 23976 | 72151;72152;72153 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
N2A | 23049 | 69370;69371;69372 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
N2B | 16552 | 49879;49880;49881 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
Novex-1 | 16677 | 50254;50255;50256 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
Novex-2 | 16744 | 50455;50456;50457 | chr2:178569283;178569282;178569281 | chr2:179434010;179434009;179434008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.999 | D | 0.648 | 0.47 | 0.829797144985 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.094 | likely_benign | 0.1013 | benign | -0.722 | Destabilizing | 0.64 | D | 0.433 | neutral | N | 0.479760392 | None | None | N |
S/C | 0.1051 | likely_benign | 0.1122 | benign | -1.067 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
S/D | 0.764 | likely_pathogenic | 0.8206 | pathogenic | -2.115 | Highly Destabilizing | 0.984 | D | 0.508 | neutral | None | None | None | None | N |
S/E | 0.769 | likely_pathogenic | 0.8195 | pathogenic | -1.991 | Destabilizing | 0.988 | D | 0.511 | neutral | None | None | None | None | N |
S/F | 0.2037 | likely_benign | 0.2439 | benign | -0.775 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/G | 0.1438 | likely_benign | 0.1682 | benign | -1.018 | Destabilizing | 0.991 | D | 0.444 | neutral | None | None | None | None | N |
S/H | 0.3853 | ambiguous | 0.4276 | ambiguous | -1.414 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
S/I | 0.3363 | likely_benign | 0.4097 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
S/K | 0.8081 | likely_pathogenic | 0.8573 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.504 | neutral | None | None | None | None | N |
S/L | 0.1673 | likely_benign | 0.1934 | benign | -0.011 | Destabilizing | 0.999 | D | 0.648 | neutral | D | 0.543583038 | None | None | N |
S/M | 0.2111 | likely_benign | 0.243 | benign | -0.083 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/N | 0.2869 | likely_benign | 0.3323 | benign | -1.334 | Destabilizing | 0.875 | D | 0.518 | neutral | None | None | None | None | N |
S/P | 0.9937 | likely_pathogenic | 0.9954 | pathogenic | -0.215 | Destabilizing | 0.997 | D | 0.746 | deleterious | D | 0.543583038 | None | None | N |
S/Q | 0.6254 | likely_pathogenic | 0.6748 | pathogenic | -1.317 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
S/R | 0.733 | likely_pathogenic | 0.7914 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/T | 0.0904 | likely_benign | 0.0984 | benign | -0.965 | Destabilizing | 0.003 | N | 0.35 | neutral | N | 0.521756754 | None | None | N |
S/V | 0.3018 | likely_benign | 0.3514 | ambiguous | -0.215 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
S/W | 0.4872 | ambiguous | 0.5513 | ambiguous | -1.03 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
S/Y | 0.2269 | likely_benign | 0.2676 | benign | -0.588 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.