Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25618 | 77077;77078;77079 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
N2AB | 23977 | 72154;72155;72156 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
N2A | 23050 | 69373;69374;69375 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
N2B | 16553 | 49882;49883;49884 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
Novex-1 | 16678 | 50257;50258;50259 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
Novex-2 | 16745 | 50458;50459;50460 | chr2:178569280;178569279;178569278 | chr2:179434007;179434006;179434005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.998 | N | 0.531 | 0.263 | 0.446510307777 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2904 | likely_benign | 0.3425 | ambiguous | -2.347 | Highly Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.479040553 | None | None | N |
V/C | 0.8095 | likely_pathogenic | 0.8381 | pathogenic | -2.11 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/D | 0.9966 | likely_pathogenic | 0.9976 | pathogenic | -3.033 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/E | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | -2.716 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.535550733 | None | None | N |
V/F | 0.7546 | likely_pathogenic | 0.7774 | pathogenic | -1.385 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/G | 0.7728 | likely_pathogenic | 0.8112 | pathogenic | -2.975 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.546907039 | None | None | N |
V/H | 0.9956 | likely_pathogenic | 0.9966 | pathogenic | -2.82 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.0972 | likely_benign | 0.103 | benign | -0.534 | Destabilizing | 0.998 | D | 0.531 | neutral | N | 0.508203093 | None | None | N |
V/K | 0.9939 | likely_pathogenic | 0.9949 | pathogenic | -1.848 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.373 | ambiguous | 0.4371 | ambiguous | -0.534 | Destabilizing | 0.995 | D | 0.635 | neutral | N | 0.467454764 | None | None | N |
V/M | 0.4305 | ambiguous | 0.4661 | ambiguous | -0.93 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/N | 0.9818 | likely_pathogenic | 0.9867 | pathogenic | -2.497 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/P | 0.9959 | likely_pathogenic | 0.9971 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Q | 0.9847 | likely_pathogenic | 0.9873 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/R | 0.9857 | likely_pathogenic | 0.9883 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/S | 0.8052 | likely_pathogenic | 0.8474 | pathogenic | -3.117 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/T | 0.6244 | likely_pathogenic | 0.6871 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/W | 0.9976 | likely_pathogenic | 0.9982 | pathogenic | -1.874 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/Y | 0.9804 | likely_pathogenic | 0.9844 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.