Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25623 | 77092;77093;77094 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
N2AB | 23982 | 72169;72170;72171 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
N2A | 23055 | 69388;69389;69390 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
N2B | 16558 | 49897;49898;49899 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
Novex-1 | 16683 | 50272;50273;50274 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
Novex-2 | 16750 | 50473;50474;50475 | chr2:178569265;178569264;178569263 | chr2:179433992;179433991;179433990 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.698 | N | 0.636 | 0.41 | 0.436671004673 | gnomAD-4.0.0 | 1.61171E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89382E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2866 | likely_benign | 0.3049 | benign | -0.694 | Destabilizing | 0.822 | D | 0.612 | neutral | N | 0.472662685 | None | None | I |
E/C | 0.9081 | likely_pathogenic | 0.9203 | pathogenic | -0.348 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | I |
E/D | 0.1113 | likely_benign | 0.1097 | benign | -1.043 | Destabilizing | 0.014 | N | 0.228 | neutral | N | 0.432921474 | None | None | I |
E/F | 0.8696 | likely_pathogenic | 0.8926 | pathogenic | -0.457 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | I |
E/G | 0.3379 | likely_benign | 0.3489 | ambiguous | -1.014 | Destabilizing | 0.698 | D | 0.636 | neutral | N | 0.485032949 | None | None | I |
E/H | 0.6947 | likely_pathogenic | 0.7226 | pathogenic | -0.769 | Destabilizing | 0.978 | D | 0.619 | neutral | None | None | None | None | I |
E/I | 0.5273 | ambiguous | 0.5643 | pathogenic | 0.159 | Stabilizing | 0.978 | D | 0.779 | deleterious | None | None | None | None | I |
E/K | 0.4176 | ambiguous | 0.4367 | ambiguous | -0.657 | Destabilizing | 0.822 | D | 0.493 | neutral | N | 0.49383386 | None | None | I |
E/L | 0.5208 | ambiguous | 0.5455 | ambiguous | 0.159 | Stabilizing | 0.978 | D | 0.77 | deleterious | None | None | None | None | I |
E/M | 0.5542 | ambiguous | 0.5891 | pathogenic | 0.564 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
E/N | 0.3064 | likely_benign | 0.3217 | benign | -0.919 | Destabilizing | 0.043 | N | 0.317 | neutral | None | None | None | None | I |
E/P | 0.98 | likely_pathogenic | 0.9814 | pathogenic | -0.104 | Destabilizing | 0.978 | D | 0.751 | deleterious | None | None | None | None | I |
E/Q | 0.2307 | likely_benign | 0.2443 | benign | -0.816 | Destabilizing | 0.942 | D | 0.605 | neutral | N | 0.518038872 | None | None | I |
E/R | 0.6206 | likely_pathogenic | 0.6491 | pathogenic | -0.435 | Destabilizing | 0.956 | D | 0.622 | neutral | None | None | None | None | I |
E/S | 0.2839 | likely_benign | 0.303 | benign | -1.195 | Destabilizing | 0.754 | D | 0.486 | neutral | None | None | None | None | I |
E/T | 0.3532 | ambiguous | 0.3791 | ambiguous | -0.949 | Destabilizing | 0.86 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/V | 0.3513 | ambiguous | 0.3804 | ambiguous | -0.104 | Destabilizing | 0.971 | D | 0.772 | deleterious | N | 0.4760565 | None | None | I |
E/W | 0.965 | likely_pathogenic | 0.9713 | pathogenic | -0.342 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/Y | 0.7616 | likely_pathogenic | 0.7878 | pathogenic | -0.262 | Destabilizing | 0.993 | D | 0.782 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.