Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25624 | 77095;77096;77097 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
N2AB | 23983 | 72172;72173;72174 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
N2A | 23056 | 69391;69392;69393 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
N2B | 16559 | 49900;49901;49902 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
Novex-1 | 16684 | 50275;50276;50277 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
Novex-2 | 16751 | 50476;50477;50478 | chr2:178569262;178569261;178569260 | chr2:179433989;179433988;179433987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.807 | N | 0.699 | 0.381 | 0.240491677333 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
P/L | None | None | 0.994 | N | 0.853 | 0.451 | 0.685676517872 | gnomAD-4.0.0 | 1.61278E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8958E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0749 | likely_benign | 0.0793 | benign | -1.855 | Destabilizing | 0.807 | D | 0.699 | prob.neutral | N | 0.484025085 | None | None | I |
P/C | 0.5568 | ambiguous | 0.6122 | pathogenic | -1.189 | Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | I |
P/D | 0.7051 | likely_pathogenic | 0.7311 | pathogenic | -2.231 | Highly Destabilizing | 0.825 | D | 0.837 | deleterious | None | None | None | None | I |
P/E | 0.4497 | ambiguous | 0.4756 | ambiguous | -2.111 | Highly Destabilizing | 0.882 | D | 0.781 | deleterious | None | None | None | None | I |
P/F | 0.5598 | ambiguous | 0.6056 | pathogenic | -1.267 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | I |
P/G | 0.4394 | ambiguous | 0.4617 | ambiguous | -2.266 | Highly Destabilizing | 0.98 | D | 0.785 | deleterious | None | None | None | None | I |
P/H | 0.3288 | likely_benign | 0.3619 | ambiguous | -1.797 | Destabilizing | 0.242 | N | 0.43 | neutral | D | 0.52325983 | None | None | I |
P/I | 0.2568 | likely_benign | 0.2794 | benign | -0.759 | Destabilizing | 0.998 | D | 0.884 | deleterious | None | None | None | None | I |
P/K | 0.4913 | ambiguous | 0.5272 | ambiguous | -1.702 | Destabilizing | 0.996 | D | 0.831 | deleterious | None | None | None | None | I |
P/L | 0.1087 | likely_benign | 0.1184 | benign | -0.759 | Destabilizing | 0.994 | D | 0.853 | deleterious | N | 0.494938131 | None | None | I |
P/M | 0.2123 | likely_benign | 0.2211 | benign | -0.59 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
P/N | 0.3966 | ambiguous | 0.4283 | ambiguous | -1.738 | Destabilizing | 0.937 | D | 0.862 | deleterious | None | None | None | None | I |
P/Q | 0.2134 | likely_benign | 0.2282 | benign | -1.762 | Destabilizing | 0.989 | D | 0.869 | deleterious | None | None | None | None | I |
P/R | 0.4238 | ambiguous | 0.4653 | ambiguous | -1.271 | Destabilizing | 0.994 | D | 0.858 | deleterious | N | 0.506863868 | None | None | I |
P/S | 0.1613 | likely_benign | 0.1735 | benign | -2.242 | Highly Destabilizing | 0.98 | D | 0.773 | deleterious | N | 0.485049857 | None | None | I |
P/T | 0.1283 | likely_benign | 0.1387 | benign | -2.0 | Highly Destabilizing | 0.978 | D | 0.841 | deleterious | N | 0.501432592 | None | None | I |
P/V | 0.1792 | likely_benign | 0.1935 | benign | -1.095 | Destabilizing | 0.988 | D | 0.856 | deleterious | None | None | None | None | I |
P/W | 0.835 | likely_pathogenic | 0.8602 | pathogenic | -1.619 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
P/Y | 0.5723 | likely_pathogenic | 0.6116 | pathogenic | -1.277 | Destabilizing | 0.992 | D | 0.886 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.