Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25631 | 77116;77117;77118 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
N2AB | 23990 | 72193;72194;72195 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
N2A | 23063 | 69412;69413;69414 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
N2B | 16566 | 49921;49922;49923 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
Novex-1 | 16691 | 50296;50297;50298 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
Novex-2 | 16758 | 50497;50498;50499 | chr2:178569241;178569240;178569239 | chr2:179433968;179433967;179433966 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.996 | N | 0.721 | 0.389 | 0.510054698054 | gnomAD-4.0.0 | 2.75659E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.73496E-05 | 0 |
S/P | None | None | 0.986 | N | 0.743 | 0.427 | 0.296679040009 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0646 | likely_benign | 0.0692 | benign | -0.824 | Destabilizing | None | N | 0.328 | neutral | N | 0.470188996 | None | None | I |
S/C | 0.0898 | likely_benign | 0.1069 | benign | -0.445 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | N | 0.487679522 | None | None | I |
S/D | 0.8342 | likely_pathogenic | 0.8181 | pathogenic | -0.268 | Destabilizing | 0.963 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/E | 0.8684 | likely_pathogenic | 0.8728 | pathogenic | -0.28 | Destabilizing | 0.947 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/F | 0.4546 | ambiguous | 0.4935 | ambiguous | -1.006 | Destabilizing | 0.996 | D | 0.767 | deleterious | N | 0.51467132 | None | None | I |
S/G | 0.1681 | likely_benign | 0.1816 | benign | -1.067 | Destabilizing | 0.83 | D | 0.642 | neutral | None | None | None | None | I |
S/H | 0.7372 | likely_pathogenic | 0.7431 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
S/I | 0.4069 | ambiguous | 0.5053 | ambiguous | -0.284 | Destabilizing | 0.994 | D | 0.766 | deleterious | None | None | None | None | I |
S/K | 0.9526 | likely_pathogenic | 0.9613 | pathogenic | -0.789 | Destabilizing | 0.98 | D | 0.688 | prob.neutral | None | None | None | None | I |
S/L | 0.1858 | likely_benign | 0.2172 | benign | -0.284 | Destabilizing | 0.98 | D | 0.688 | prob.neutral | None | None | None | None | I |
S/M | 0.3086 | likely_benign | 0.3584 | ambiguous | 0.076 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
S/N | 0.4355 | ambiguous | 0.4497 | ambiguous | -0.691 | Destabilizing | 0.752 | D | 0.727 | prob.delet. | None | None | None | None | I |
S/P | 0.981 | likely_pathogenic | 0.9853 | pathogenic | -0.431 | Destabilizing | 0.986 | D | 0.743 | deleterious | N | 0.521001196 | None | None | I |
S/Q | 0.7888 | likely_pathogenic | 0.816 | pathogenic | -0.851 | Destabilizing | 0.997 | D | 0.739 | prob.delet. | None | None | None | None | I |
S/R | 0.9259 | likely_pathogenic | 0.9382 | pathogenic | -0.637 | Destabilizing | 0.997 | D | 0.744 | deleterious | None | None | None | None | I |
S/T | 0.1477 | likely_benign | 0.167 | benign | -0.724 | Destabilizing | 0.318 | N | 0.64 | neutral | N | 0.475296032 | None | None | I |
S/V | 0.2495 | likely_benign | 0.3331 | benign | -0.431 | Destabilizing | 0.9 | D | 0.69 | prob.neutral | None | None | None | None | I |
S/W | 0.7308 | likely_pathogenic | 0.7458 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
S/Y | 0.4847 | ambiguous | 0.5005 | ambiguous | -0.732 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.509644891 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.