Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25632 | 77119;77120;77121 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
N2AB | 23991 | 72196;72197;72198 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
N2A | 23064 | 69415;69416;69417 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
N2B | 16567 | 49924;49925;49926 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
Novex-1 | 16692 | 50299;50300;50301 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
Novex-2 | 16759 | 50500;50501;50502 | chr2:178569238;178569237;178569236 | chr2:179433965;179433964;179433963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs984799615 | None | 0.924 | N | 0.582 | 0.397 | 0.44349138644 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs984799615 | None | 0.924 | N | 0.582 | 0.397 | 0.44349138644 | gnomAD-4.0.0 | 4.05989E-06 | None | None | None | None | I | None | 6.98763E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.594 | likely_pathogenic | 0.6429 | pathogenic | -0.048 | Destabilizing | 0.939 | D | 0.555 | neutral | None | None | None | None | I |
K/C | 0.8508 | likely_pathogenic | 0.8843 | pathogenic | -0.193 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
K/D | 0.8552 | likely_pathogenic | 0.8784 | pathogenic | 0.095 | Stabilizing | 0.885 | D | 0.553 | neutral | None | None | None | None | I |
K/E | 0.5027 | ambiguous | 0.5427 | ambiguous | 0.121 | Stabilizing | 0.011 | N | 0.331 | neutral | N | 0.459334498 | None | None | I |
K/F | 0.9299 | likely_pathogenic | 0.9458 | pathogenic | -0.127 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | I |
K/G | 0.7643 | likely_pathogenic | 0.8122 | pathogenic | -0.286 | Destabilizing | 0.982 | D | 0.532 | neutral | None | None | None | None | I |
K/H | 0.4968 | ambiguous | 0.5579 | ambiguous | -0.555 | Destabilizing | 0.994 | D | 0.618 | neutral | None | None | None | None | I |
K/I | 0.6189 | likely_pathogenic | 0.651 | pathogenic | 0.51 | Stabilizing | 0.708 | D | 0.651 | neutral | N | 0.519020306 | None | None | I |
K/L | 0.6329 | likely_pathogenic | 0.6781 | pathogenic | 0.51 | Stabilizing | 0.613 | D | 0.55 | neutral | None | None | None | None | I |
K/M | 0.5478 | ambiguous | 0.5947 | pathogenic | 0.278 | Stabilizing | 0.993 | D | 0.611 | neutral | None | None | None | None | I |
K/N | 0.758 | likely_pathogenic | 0.7887 | pathogenic | 0.188 | Stabilizing | 0.976 | D | 0.626 | neutral | N | 0.515267925 | None | None | I |
K/P | 0.6488 | likely_pathogenic | 0.6869 | pathogenic | 0.353 | Stabilizing | 0.991 | D | 0.634 | neutral | None | None | None | None | I |
K/Q | 0.2762 | likely_benign | 0.3176 | benign | 0.028 | Stabilizing | 0.711 | D | 0.615 | neutral | N | 0.519769668 | None | None | I |
K/R | 0.0796 | likely_benign | 0.0852 | benign | -0.093 | Destabilizing | 0.682 | D | 0.491 | neutral | N | 0.483022221 | None | None | I |
K/S | 0.7439 | likely_pathogenic | 0.7827 | pathogenic | -0.331 | Destabilizing | 0.939 | D | 0.549 | neutral | None | None | None | None | I |
K/T | 0.4756 | ambiguous | 0.5139 | ambiguous | -0.145 | Destabilizing | 0.924 | D | 0.582 | neutral | N | 0.467494444 | None | None | I |
K/V | 0.5287 | ambiguous | 0.5667 | pathogenic | 0.353 | Stabilizing | 0.809 | D | 0.632 | neutral | None | None | None | None | I |
K/W | 0.91 | likely_pathogenic | 0.9347 | pathogenic | -0.107 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
K/Y | 0.8469 | likely_pathogenic | 0.8773 | pathogenic | 0.225 | Stabilizing | 0.939 | D | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.