Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25635 | 77128;77129;77130 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
N2AB | 23994 | 72205;72206;72207 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
N2A | 23067 | 69424;69425;69426 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
N2B | 16570 | 49933;49934;49935 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
Novex-1 | 16695 | 50308;50309;50310 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
Novex-2 | 16762 | 50509;50510;50511 | chr2:178569229;178569228;178569227 | chr2:179433956;179433955;179433954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.939 | N | 0.629 | 0.266 | 0.141422826196 | gnomAD-4.0.0 | 6.88841E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03778E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7426 | likely_pathogenic | 0.7224 | pathogenic | -0.76 | Destabilizing | 0.1 | N | 0.637 | neutral | None | None | None | None | N |
N/C | 0.5343 | ambiguous | 0.5007 | ambiguous | -0.199 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
N/D | 0.7162 | likely_pathogenic | 0.7013 | pathogenic | -1.695 | Destabilizing | 0.555 | D | 0.559 | neutral | N | 0.480914664 | None | None | N |
N/E | 0.9431 | likely_pathogenic | 0.9372 | pathogenic | -1.495 | Destabilizing | 0.846 | D | 0.59 | neutral | None | None | None | None | N |
N/F | 0.8757 | likely_pathogenic | 0.8809 | pathogenic | -0.282 | Destabilizing | 0.973 | D | 0.789 | deleterious | None | None | None | None | N |
N/G | 0.5398 | ambiguous | 0.5182 | ambiguous | -1.152 | Destabilizing | 0.851 | D | 0.562 | neutral | None | None | None | None | N |
N/H | 0.2353 | likely_benign | 0.24 | benign | -0.933 | Destabilizing | 0.018 | N | 0.188 | neutral | N | 0.462665591 | None | None | N |
N/I | 0.9288 | likely_pathogenic | 0.9196 | pathogenic | 0.273 | Stabilizing | 0.953 | D | 0.785 | deleterious | N | 0.512705856 | None | None | N |
N/K | 0.8909 | likely_pathogenic | 0.8862 | pathogenic | -0.409 | Destabilizing | 0.939 | D | 0.629 | neutral | N | 0.468188779 | None | None | N |
N/L | 0.8513 | likely_pathogenic | 0.8349 | pathogenic | 0.273 | Stabilizing | 0.794 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/M | 0.8548 | likely_pathogenic | 0.8454 | pathogenic | 0.58 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/P | 0.9968 | likely_pathogenic | 0.9963 | pathogenic | -0.042 | Destabilizing | 0.921 | D | 0.758 | deleterious | None | None | None | None | N |
N/Q | 0.8087 | likely_pathogenic | 0.8028 | pathogenic | -0.971 | Destabilizing | 0.982 | D | 0.682 | prob.neutral | None | None | None | None | N |
N/R | 0.8593 | likely_pathogenic | 0.8552 | pathogenic | -0.691 | Destabilizing | 0.954 | D | 0.662 | neutral | None | None | None | None | N |
N/S | 0.233 | likely_benign | 0.2239 | benign | -1.212 | Destabilizing | 0.047 | N | 0.225 | neutral | N | 0.47878705 | None | None | N |
N/T | 0.6583 | likely_pathogenic | 0.6283 | pathogenic | -0.837 | Destabilizing | 0.491 | N | 0.609 | neutral | N | 0.481977848 | None | None | N |
N/V | 0.9055 | likely_pathogenic | 0.8911 | pathogenic | -0.042 | Destabilizing | 0.392 | N | 0.763 | deleterious | None | None | None | None | N |
N/W | 0.953 | likely_pathogenic | 0.9548 | pathogenic | -0.289 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
N/Y | 0.3564 | ambiguous | 0.3737 | ambiguous | 0.065 | Stabilizing | 0.046 | N | 0.609 | neutral | N | 0.482484827 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.