Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25636 | 77131;77132;77133 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
N2AB | 23995 | 72208;72209;72210 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
N2A | 23068 | 69427;69428;69429 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
N2B | 16571 | 49936;49937;49938 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
Novex-1 | 16696 | 50311;50312;50313 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
Novex-2 | 16763 | 50512;50513;50514 | chr2:178569226;178569225;178569224 | chr2:179433953;179433952;179433951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2154167623 | None | 1.0 | D | 0.811 | 0.776 | 0.889359714302 | gnomAD-4.0.0 | 1.61512E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89919E-06 | 0 | 0 |
Y/S | None | None | 1.0 | D | 0.833 | 0.769 | 0.908842003314 | gnomAD-4.0.0 | 1.61512E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46447E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9939 | likely_pathogenic | 0.9938 | pathogenic | -3.792 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
Y/C | 0.8742 | likely_pathogenic | 0.8818 | pathogenic | -2.415 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.65326267 | None | None | N |
Y/D | 0.9945 | likely_pathogenic | 0.9948 | pathogenic | -3.974 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.66968564 | None | None | N |
Y/E | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -3.776 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/F | 0.1641 | likely_benign | 0.1823 | benign | -1.443 | Destabilizing | 0.18 | N | 0.454 | neutral | D | 0.578709251 | None | None | N |
Y/G | 0.9879 | likely_pathogenic | 0.9883 | pathogenic | -4.177 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/H | 0.9472 | likely_pathogenic | 0.9479 | pathogenic | -2.724 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.643976084 | None | None | N |
Y/I | 0.9531 | likely_pathogenic | 0.9524 | pathogenic | -2.479 | Highly Destabilizing | 0.981 | D | 0.755 | deleterious | None | None | None | None | N |
Y/K | 0.9979 | likely_pathogenic | 0.998 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/L | 0.9245 | likely_pathogenic | 0.9232 | pathogenic | -2.479 | Highly Destabilizing | 0.938 | D | 0.705 | prob.neutral | None | None | None | None | N |
Y/M | 0.972 | likely_pathogenic | 0.9736 | pathogenic | -2.31 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Y/N | 0.961 | likely_pathogenic | 0.9608 | pathogenic | -3.339 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.66968564 | None | None | N |
Y/P | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.936 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/Q | 0.9966 | likely_pathogenic | 0.9968 | pathogenic | -3.122 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Y/R | 0.992 | likely_pathogenic | 0.9925 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/S | 0.9775 | likely_pathogenic | 0.9769 | pathogenic | -3.687 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.66968564 | None | None | N |
Y/T | 0.9902 | likely_pathogenic | 0.9897 | pathogenic | -3.377 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/V | 0.9272 | likely_pathogenic | 0.9248 | pathogenic | -2.936 | Highly Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/W | 0.8161 | likely_pathogenic | 0.8293 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.