Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25648 | 77167;77168;77169 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
N2AB | 24007 | 72244;72245;72246 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
N2A | 23080 | 69463;69464;69465 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
N2B | 16583 | 49972;49973;49974 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
Novex-1 | 16708 | 50347;50348;50349 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
Novex-2 | 16775 | 50548;50549;50550 | chr2:178569190;178569189;178569188 | chr2:179433917;179433916;179433915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs376340301 | -1.198 | 0.999 | N | 0.735 | 0.457 | None | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.95 | likely_pathogenic | 0.9574 | pathogenic | -2.428 | Highly Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
Y/C | 0.6613 | likely_pathogenic | 0.7173 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.461944128 | None | None | N |
Y/D | 0.9445 | likely_pathogenic | 0.9466 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.474501748 | None | None | N |
Y/E | 0.9928 | likely_pathogenic | 0.9933 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
Y/F | 0.0739 | likely_benign | 0.0805 | benign | -1.207 | Destabilizing | 0.872 | D | 0.537 | neutral | N | 0.438745795 | None | None | N |
Y/G | 0.9549 | likely_pathogenic | 0.9585 | pathogenic | -2.717 | Highly Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Y/H | 0.6881 | likely_pathogenic | 0.7227 | pathogenic | -0.943 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.470742766 | None | None | N |
Y/I | 0.9361 | likely_pathogenic | 0.9441 | pathogenic | -1.56 | Destabilizing | 0.976 | D | 0.736 | prob.delet. | None | None | None | None | N |
Y/K | 0.9941 | likely_pathogenic | 0.9946 | pathogenic | -0.991 | Destabilizing | 0.992 | D | 0.705 | prob.neutral | None | None | None | None | N |
Y/L | 0.8969 | likely_pathogenic | 0.9049 | pathogenic | -1.56 | Destabilizing | 0.854 | D | 0.587 | neutral | None | None | None | None | N |
Y/M | 0.9448 | likely_pathogenic | 0.9486 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/N | 0.8496 | likely_pathogenic | 0.868 | pathogenic | -1.21 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.474755237 | None | None | N |
Y/P | 0.9669 | likely_pathogenic | 0.9724 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
Y/Q | 0.9857 | likely_pathogenic | 0.9873 | pathogenic | -1.244 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Y/R | 0.9828 | likely_pathogenic | 0.9851 | pathogenic | -0.409 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
Y/S | 0.8528 | likely_pathogenic | 0.866 | pathogenic | -1.827 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.509605815 | None | None | N |
Y/T | 0.9611 | likely_pathogenic | 0.9657 | pathogenic | -1.671 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
Y/V | 0.891 | likely_pathogenic | 0.9027 | pathogenic | -1.844 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
Y/W | 0.2562 | likely_benign | 0.274 | benign | -0.719 | Destabilizing | 0.378 | N | 0.3 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.