Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25649 | 77170;77171;77172 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
N2AB | 24008 | 72247;72248;72249 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
N2A | 23081 | 69466;69467;69468 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
N2B | 16584 | 49975;49976;49977 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
Novex-1 | 16709 | 50350;50351;50352 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
Novex-2 | 16776 | 50551;50552;50553 | chr2:178569187;178569186;178569185 | chr2:179433914;179433913;179433912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.805 | N | 0.447 | 0.11 | 0.207176502487 | gnomAD-4.0.0 | 1.37102E-06 | None | None | None | None | N | None | 3.00012E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0043E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5568 | ambiguous | 0.5612 | ambiguous | -0.852 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
A/D | 0.8383 | likely_pathogenic | 0.839 | pathogenic | -0.585 | Destabilizing | 0.967 | D | 0.561 | neutral | N | 0.516670648 | None | None | N |
A/E | 0.7593 | likely_pathogenic | 0.7511 | pathogenic | -0.685 | Destabilizing | 0.916 | D | 0.517 | neutral | None | None | None | None | N |
A/F | 0.5462 | ambiguous | 0.5691 | pathogenic | -0.95 | Destabilizing | 0.987 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/G | 0.2524 | likely_benign | 0.2545 | benign | -0.816 | Destabilizing | 0.63 | D | 0.488 | neutral | N | 0.51465185 | None | None | N |
A/H | 0.7594 | likely_pathogenic | 0.7567 | pathogenic | -0.756 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
A/I | 0.331 | likely_benign | 0.3487 | ambiguous | -0.455 | Destabilizing | 0.987 | D | 0.629 | neutral | None | None | None | None | N |
A/K | 0.8887 | likely_pathogenic | 0.8901 | pathogenic | -0.935 | Destabilizing | 0.916 | D | 0.508 | neutral | None | None | None | None | N |
A/L | 0.2493 | likely_benign | 0.257 | benign | -0.455 | Destabilizing | 0.916 | D | 0.513 | neutral | None | None | None | None | N |
A/M | 0.2736 | likely_benign | 0.2764 | benign | -0.482 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
A/N | 0.4733 | ambiguous | 0.4806 | ambiguous | -0.647 | Destabilizing | 0.975 | D | 0.566 | neutral | None | None | None | None | N |
A/P | 0.9114 | likely_pathogenic | 0.9197 | pathogenic | -0.489 | Destabilizing | 0.983 | D | 0.629 | neutral | N | 0.46584860299999997 | None | None | N |
A/Q | 0.621 | likely_pathogenic | 0.6132 | pathogenic | -0.882 | Destabilizing | 0.975 | D | 0.648 | neutral | None | None | None | None | N |
A/R | 0.8533 | likely_pathogenic | 0.8579 | pathogenic | -0.473 | Destabilizing | 0.975 | D | 0.638 | neutral | None | None | None | None | N |
A/S | 0.1004 | likely_benign | 0.1002 | benign | -0.946 | Destabilizing | 0.044 | N | 0.238 | neutral | N | 0.407484312 | None | None | N |
A/T | 0.0943 | likely_benign | 0.093 | benign | -0.959 | Destabilizing | 0.805 | D | 0.447 | neutral | N | 0.416450512 | None | None | N |
A/V | 0.1512 | likely_benign | 0.1601 | benign | -0.489 | Destabilizing | 0.892 | D | 0.491 | neutral | N | 0.45135252 | None | None | N |
A/W | 0.9342 | likely_pathogenic | 0.9359 | pathogenic | -1.134 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/Y | 0.7485 | likely_pathogenic | 0.7562 | pathogenic | -0.783 | Destabilizing | 0.996 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.