Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25654 | 77185;77186;77187 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
N2AB | 24013 | 72262;72263;72264 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
N2A | 23086 | 69481;69482;69483 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
N2B | 16589 | 49990;49991;49992 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
Novex-1 | 16714 | 50365;50366;50367 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
Novex-2 | 16781 | 50566;50567;50568 | chr2:178569172;178569171;178569170 | chr2:179433899;179433898;179433897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs755800765 | 0.231 | 0.005 | N | 0.152 | 0.147 | 0.0297737177859 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.72E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs755800765 | 0.231 | 0.005 | N | 0.152 | 0.147 | 0.0297737177859 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs755800765 | 0.231 | 0.005 | N | 0.152 | 0.147 | 0.0297737177859 | gnomAD-4.0.0 | 6.41134E-06 | None | None | None | None | N | None | 0 | 8.4832E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1864 | likely_benign | 0.2482 | benign | -0.589 | Destabilizing | 0.012 | N | 0.369 | neutral | None | None | None | None | N |
N/C | 0.2935 | likely_benign | 0.3564 | ambiguous | 0.401 | Stabilizing | 0.98 | D | 0.39 | neutral | None | None | None | None | N |
N/D | 0.1978 | likely_benign | 0.2502 | benign | -0.173 | Destabilizing | 0.116 | N | 0.349 | neutral | N | 0.50362678 | None | None | N |
N/E | 0.525 | ambiguous | 0.6232 | pathogenic | -0.157 | Destabilizing | 0.225 | N | 0.313 | neutral | None | None | None | None | N |
N/F | 0.5887 | likely_pathogenic | 0.6902 | pathogenic | -0.67 | Destabilizing | 0.979 | D | 0.385 | neutral | None | None | None | None | N |
N/G | 0.227 | likely_benign | 0.2969 | benign | -0.847 | Destabilizing | 0.376 | N | 0.315 | neutral | None | None | None | None | N |
N/H | 0.146 | likely_benign | 0.1732 | benign | -0.857 | Destabilizing | 0.813 | D | 0.392 | neutral | N | 0.468584081 | None | None | N |
N/I | 0.317 | likely_benign | 0.3915 | ambiguous | 0.03 | Stabilizing | 0.682 | D | 0.409 | neutral | N | 0.479923479 | None | None | N |
N/K | 0.457 | ambiguous | 0.5446 | ambiguous | -0.17 | Destabilizing | 0.005 | N | 0.152 | neutral | N | 0.450909802 | None | None | N |
N/L | 0.2924 | likely_benign | 0.358 | ambiguous | 0.03 | Stabilizing | 0.448 | N | 0.38 | neutral | None | None | None | None | N |
N/M | 0.3915 | ambiguous | 0.4696 | ambiguous | 0.516 | Stabilizing | 0.985 | D | 0.367 | neutral | None | None | None | None | N |
N/P | 0.7881 | likely_pathogenic | 0.8264 | pathogenic | -0.148 | Destabilizing | 0.553 | D | 0.378 | neutral | None | None | None | None | N |
N/Q | 0.3981 | ambiguous | 0.4768 | ambiguous | -0.53 | Destabilizing | 0.74 | D | 0.35 | neutral | None | None | None | None | N |
N/R | 0.4753 | ambiguous | 0.5695 | pathogenic | -0.175 | Destabilizing | 0.521 | D | 0.349 | neutral | None | None | None | None | N |
N/S | 0.0781 | likely_benign | 0.0865 | benign | -0.399 | Destabilizing | 0.027 | N | 0.381 | neutral | N | 0.48683053 | None | None | N |
N/T | 0.138 | likely_benign | 0.1664 | benign | -0.222 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.455968905 | None | None | N |
N/V | 0.2522 | likely_benign | 0.3142 | benign | -0.148 | Destabilizing | 0.064 | N | 0.407 | neutral | None | None | None | None | N |
N/W | 0.8505 | likely_pathogenic | 0.8925 | pathogenic | -0.577 | Destabilizing | 0.994 | D | 0.547 | neutral | None | None | None | None | N |
N/Y | 0.2419 | likely_benign | 0.296 | benign | -0.368 | Destabilizing | 0.973 | D | 0.371 | neutral | N | 0.46776116 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.