Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25657 | 77194;77195;77196 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
N2AB | 24016 | 72271;72272;72273 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
N2A | 23089 | 69490;69491;69492 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
N2B | 16592 | 49999;50000;50001 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
Novex-1 | 16717 | 50374;50375;50376 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
Novex-2 | 16784 | 50575;50576;50577 | chr2:178569163;178569162;178569161 | chr2:179433890;179433889;179433888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.897 | N | 0.531 | 0.197 | 0.1749357433 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86031E-06 | 0 | 0 |
K/T | None | None | 0.978 | N | 0.552 | 0.287 | 0.309530620856 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6267 | likely_pathogenic | 0.6903 | pathogenic | -0.185 | Destabilizing | 0.931 | D | 0.495 | neutral | None | None | None | None | N |
K/C | 0.7928 | likely_pathogenic | 0.8361 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/D | 0.8104 | likely_pathogenic | 0.8551 | pathogenic | 0.059 | Stabilizing | 0.99 | D | 0.563 | neutral | None | None | None | None | N |
K/E | 0.4471 | ambiguous | 0.537 | ambiguous | 0.128 | Stabilizing | 0.86 | D | 0.479 | neutral | N | 0.494852581 | None | None | N |
K/F | 0.9314 | likely_pathogenic | 0.9543 | pathogenic | -0.145 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
K/G | 0.64 | likely_pathogenic | 0.6924 | pathogenic | -0.453 | Destabilizing | 0.078 | N | 0.327 | neutral | None | None | None | None | N |
K/H | 0.4444 | ambiguous | 0.517 | ambiguous | -0.608 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
K/I | 0.7164 | likely_pathogenic | 0.7724 | pathogenic | 0.467 | Stabilizing | 0.945 | D | 0.657 | neutral | None | None | None | None | N |
K/L | 0.671 | likely_pathogenic | 0.7261 | pathogenic | 0.467 | Stabilizing | 0.85 | D | 0.505 | neutral | None | None | None | None | N |
K/M | 0.5665 | likely_pathogenic | 0.6317 | pathogenic | 0.033 | Stabilizing | 0.995 | D | 0.599 | neutral | N | 0.488080688 | None | None | N |
K/N | 0.6986 | likely_pathogenic | 0.7558 | pathogenic | -0.057 | Destabilizing | 0.986 | D | 0.503 | neutral | N | 0.516534575 | None | None | N |
K/P | 0.9404 | likely_pathogenic | 0.955 | pathogenic | 0.278 | Stabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | N |
K/Q | 0.2226 | likely_benign | 0.2683 | benign | -0.091 | Destabilizing | 0.897 | D | 0.531 | neutral | N | 0.500970476 | None | None | N |
K/R | 0.0825 | likely_benign | 0.0873 | benign | -0.163 | Destabilizing | 0.027 | N | 0.24 | neutral | N | 0.435748349 | None | None | N |
K/S | 0.6546 | likely_pathogenic | 0.7134 | pathogenic | -0.551 | Destabilizing | 0.964 | D | 0.482 | neutral | None | None | None | None | N |
K/T | 0.4209 | ambiguous | 0.4738 | ambiguous | -0.304 | Destabilizing | 0.978 | D | 0.552 | neutral | N | 0.476456034 | None | None | N |
K/V | 0.6569 | likely_pathogenic | 0.7154 | pathogenic | 0.278 | Stabilizing | 0.882 | D | 0.609 | neutral | None | None | None | None | N |
K/W | 0.8801 | likely_pathogenic | 0.919 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
K/Y | 0.8319 | likely_pathogenic | 0.8762 | pathogenic | 0.159 | Stabilizing | 0.965 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.