Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25658 | 77197;77198;77199 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
N2AB | 24017 | 72274;72275;72276 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
N2A | 23090 | 69493;69494;69495 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
N2B | 16593 | 50002;50003;50004 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
Novex-1 | 16718 | 50377;50378;50379 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
Novex-2 | 16785 | 50578;50579;50580 | chr2:178569160;178569159;178569158 | chr2:179433887;179433886;179433885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.161 | 0.106 | 0.0401082797425 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 2.2876E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1467 | likely_benign | 0.1777 | benign | -0.942 | Destabilizing | 0.025 | N | 0.39 | neutral | None | None | None | None | N |
N/C | 0.1303 | likely_benign | 0.1567 | benign | None | Stabilizing | 0.667 | D | 0.475 | neutral | None | None | None | None | N |
N/D | 0.2548 | likely_benign | 0.2897 | benign | -0.422 | Destabilizing | 0.081 | N | 0.299 | neutral | N | 0.511800759 | None | None | N |
N/E | 0.4757 | ambiguous | 0.5435 | ambiguous | -0.247 | Destabilizing | 0.104 | N | 0.282 | neutral | None | None | None | None | N |
N/F | 0.384 | ambiguous | 0.462 | ambiguous | -0.639 | Destabilizing | 0.22 | N | 0.587 | neutral | None | None | None | None | N |
N/G | 0.2116 | likely_benign | 0.2569 | benign | -1.325 | Destabilizing | 0.055 | N | 0.272 | neutral | None | None | None | None | N |
N/H | 0.1281 | likely_benign | 0.1532 | benign | -0.752 | Destabilizing | 0.001 | N | 0.303 | neutral | N | 0.494484434 | None | None | N |
N/I | 0.1331 | likely_benign | 0.1504 | benign | 0.063 | Stabilizing | 0.096 | N | 0.451 | neutral | N | 0.465462847 | None | None | N |
N/K | 0.3112 | likely_benign | 0.3696 | ambiguous | 0.124 | Stabilizing | 0.042 | N | 0.295 | neutral | N | 0.482728645 | None | None | N |
N/L | 0.1121 | likely_benign | 0.1265 | benign | 0.063 | Stabilizing | 0.025 | N | 0.371 | neutral | None | None | None | None | N |
N/M | 0.1489 | likely_benign | 0.1715 | benign | 0.292 | Stabilizing | 0.005 | N | 0.394 | neutral | None | None | None | None | N |
N/P | 0.2675 | likely_benign | 0.3257 | benign | -0.243 | Destabilizing | 0.364 | N | 0.516 | neutral | None | None | None | None | N |
N/Q | 0.2944 | likely_benign | 0.3562 | ambiguous | -0.438 | Destabilizing | 0.22 | N | 0.305 | neutral | None | None | None | None | N |
N/R | 0.3604 | ambiguous | 0.4272 | ambiguous | 0.027 | Stabilizing | 0.22 | N | 0.273 | neutral | None | None | None | None | N |
N/S | 0.0842 | likely_benign | 0.0943 | benign | -0.814 | Destabilizing | None | N | 0.161 | neutral | N | 0.502141125 | None | None | N |
N/T | 0.0701 | likely_benign | 0.0765 | benign | -0.421 | Destabilizing | None | N | 0.155 | neutral | N | 0.346062133 | None | None | N |
N/V | 0.1386 | likely_benign | 0.1537 | benign | -0.243 | Destabilizing | 0.055 | N | 0.388 | neutral | None | None | None | None | N |
N/W | 0.7119 | likely_pathogenic | 0.7696 | pathogenic | -0.389 | Destabilizing | 0.958 | D | 0.498 | neutral | None | None | None | None | N |
N/Y | 0.1283 | likely_benign | 0.1514 | benign | -0.107 | Destabilizing | 0.175 | N | 0.589 | neutral | N | 0.470489276 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.