Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2566 | 7921;7922;7923 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
N2AB | 2566 | 7921;7922;7923 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
N2A | 2566 | 7921;7922;7923 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
N2B | 2520 | 7783;7784;7785 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
Novex-1 | 2520 | 7783;7784;7785 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
Novex-2 | 2520 | 7783;7784;7785 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
Novex-3 | 2566 | 7921;7922;7923 | chr2:178773268;178773267;178773266 | chr2:179637995;179637994;179637993 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.425 | N | 0.441 | 0.2 | 0.110078149338 | gnomAD-4.0.0 | 1.59095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77809E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2452 | likely_benign | 0.2281 | benign | -1.239 | Destabilizing | 0.3 | N | 0.461 | neutral | None | None | None | None | N |
N/C | 0.1941 | likely_benign | 0.1834 | benign | -0.457 | Destabilizing | 0.995 | D | 0.535 | neutral | None | None | None | None | N |
N/D | 0.2373 | likely_benign | 0.21 | benign | -1.667 | Destabilizing | 0.425 | N | 0.441 | neutral | N | 0.397018809 | None | None | N |
N/E | 0.3808 | ambiguous | 0.3561 | ambiguous | -1.396 | Destabilizing | 0.329 | N | 0.418 | neutral | None | None | None | None | N |
N/F | 0.3166 | likely_benign | 0.2861 | benign | -0.689 | Destabilizing | 0.893 | D | 0.577 | neutral | None | None | None | None | N |
N/G | 0.3897 | ambiguous | 0.3657 | ambiguous | -1.669 | Destabilizing | 0.495 | N | 0.424 | neutral | None | None | None | None | N |
N/H | 0.0674 | likely_benign | 0.0642 | benign | -1.102 | Destabilizing | 0.006 | N | 0.277 | neutral | N | 0.36274004 | None | None | N |
N/I | 0.1223 | likely_benign | 0.1055 | benign | -0.073 | Destabilizing | 0.473 | N | 0.539 | neutral | N | 0.41266723 | None | None | N |
N/K | 0.204 | likely_benign | 0.1861 | benign | -0.14 | Destabilizing | 0.27 | N | 0.435 | neutral | N | 0.383390913 | None | None | N |
N/L | 0.1516 | likely_benign | 0.1399 | benign | -0.073 | Destabilizing | 0.003 | N | 0.458 | neutral | None | None | None | None | N |
N/M | 0.2254 | likely_benign | 0.2003 | benign | 0.096 | Stabilizing | 0.893 | D | 0.505 | neutral | None | None | None | None | N |
N/P | 0.953 | likely_pathogenic | 0.9505 | pathogenic | -0.435 | Destabilizing | 0.828 | D | 0.515 | neutral | None | None | None | None | N |
N/Q | 0.2558 | likely_benign | 0.2413 | benign | -0.705 | Destabilizing | 0.031 | N | 0.242 | neutral | None | None | None | None | N |
N/R | 0.2136 | likely_benign | 0.2113 | benign | -0.439 | Destabilizing | 0.543 | D | 0.459 | neutral | None | None | None | None | N |
N/S | 0.1103 | likely_benign | 0.103 | benign | -1.241 | Destabilizing | 0.27 | N | 0.388 | neutral | N | 0.38365418 | None | None | N |
N/T | 0.1202 | likely_benign | 0.1086 | benign | -0.766 | Destabilizing | 0.003 | N | 0.187 | neutral | N | 0.285074559 | None | None | N |
N/V | 0.1568 | likely_benign | 0.1354 | benign | -0.435 | Destabilizing | 0.329 | N | 0.492 | neutral | None | None | None | None | N |
N/W | 0.6309 | likely_pathogenic | 0.5985 | pathogenic | -0.562 | Destabilizing | 0.995 | D | 0.546 | neutral | None | None | None | None | N |
N/Y | 0.0794 | likely_benign | 0.073 | benign | -0.215 | Destabilizing | 0.642 | D | 0.53 | neutral | N | 0.296202145 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.