Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25662 | 77209;77210;77211 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
N2AB | 24021 | 72286;72287;72288 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
N2A | 23094 | 69505;69506;69507 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
N2B | 16597 | 50014;50015;50016 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
Novex-1 | 16722 | 50389;50390;50391 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
Novex-2 | 16789 | 50590;50591;50592 | chr2:178569148;178569147;178569146 | chr2:179433875;179433874;179433873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.939 | D | 0.838 | 0.534 | 0.858602885114 | gnomAD-4.0.0 | 6.84385E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99641E-07 | 0 | 0 |
I/T | None | None | 0.684 | N | 0.78 | 0.492 | 0.677526534183 | gnomAD-4.0.0 | 6.84385E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16017E-05 | 0 |
I/V | None | None | 0.003 | N | 0.195 | 0.078 | 0.44711355012 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5043 | ambiguous | 0.5382 | ambiguous | -2.509 | Highly Destabilizing | 0.373 | N | 0.731 | prob.delet. | None | None | None | None | N |
I/C | 0.8468 | likely_pathogenic | 0.8602 | pathogenic | -1.805 | Destabilizing | 0.996 | D | 0.79 | deleterious | None | None | None | None | N |
I/D | 0.99 | likely_pathogenic | 0.9899 | pathogenic | -3.124 | Highly Destabilizing | 0.984 | D | 0.833 | deleterious | None | None | None | None | N |
I/E | 0.9753 | likely_pathogenic | 0.9747 | pathogenic | -2.818 | Highly Destabilizing | 0.953 | D | 0.803 | deleterious | None | None | None | None | N |
I/F | 0.3814 | ambiguous | 0.4189 | ambiguous | -1.516 | Destabilizing | 0.884 | D | 0.767 | deleterious | N | 0.478801524 | None | None | N |
I/G | 0.9421 | likely_pathogenic | 0.9493 | pathogenic | -3.127 | Highly Destabilizing | 0.953 | D | 0.798 | deleterious | None | None | None | None | N |
I/H | 0.9756 | likely_pathogenic | 0.9766 | pathogenic | -2.811 | Highly Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | N |
I/K | 0.9704 | likely_pathogenic | 0.9688 | pathogenic | -1.968 | Destabilizing | 0.91 | D | 0.799 | deleterious | None | None | None | None | N |
I/L | 0.2032 | likely_benign | 0.2098 | benign | -0.681 | Destabilizing | 0.063 | N | 0.443 | neutral | N | 0.505912149 | None | None | N |
I/M | 0.154 | likely_benign | 0.163 | benign | -0.734 | Destabilizing | 0.332 | N | 0.491 | neutral | D | 0.522913754 | None | None | N |
I/N | 0.9128 | likely_pathogenic | 0.907 | pathogenic | -2.578 | Highly Destabilizing | 0.939 | D | 0.838 | deleterious | D | 0.523420733 | None | None | N |
I/P | 0.9611 | likely_pathogenic | 0.9644 | pathogenic | -1.276 | Destabilizing | 0.984 | D | 0.837 | deleterious | None | None | None | None | N |
I/Q | 0.9626 | likely_pathogenic | 0.963 | pathogenic | -2.272 | Highly Destabilizing | 0.953 | D | 0.841 | deleterious | None | None | None | None | N |
I/R | 0.9543 | likely_pathogenic | 0.9542 | pathogenic | -1.967 | Destabilizing | 0.953 | D | 0.836 | deleterious | None | None | None | None | N |
I/S | 0.7946 | likely_pathogenic | 0.8046 | pathogenic | -3.224 | Highly Destabilizing | 0.684 | D | 0.782 | deleterious | N | 0.507772013 | None | None | N |
I/T | 0.4174 | ambiguous | 0.4325 | ambiguous | -2.746 | Highly Destabilizing | 0.684 | D | 0.78 | deleterious | N | 0.505062988 | None | None | N |
I/V | 0.0762 | likely_benign | 0.0778 | benign | -1.276 | Destabilizing | 0.003 | N | 0.195 | neutral | N | 0.404249219 | None | None | N |
I/W | 0.9665 | likely_pathogenic | 0.9679 | pathogenic | -1.978 | Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
I/Y | 0.9039 | likely_pathogenic | 0.9086 | pathogenic | -1.654 | Destabilizing | 0.953 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.