Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25669 | 77230;77231;77232 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
N2AB | 24028 | 72307;72308;72309 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
N2A | 23101 | 69526;69527;69528 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
N2B | 16604 | 50035;50036;50037 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
Novex-1 | 16729 | 50410;50411;50412 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
Novex-2 | 16796 | 50611;50612;50613 | chr2:178569127;178569126;178569125 | chr2:179433854;179433853;179433852 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.03 | N | 0.197 | 0.226 | 0.49336223678 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2807 | likely_benign | 0.3229 | benign | -1.723 | Destabilizing | 0.184 | N | 0.263 | neutral | None | None | None | None | N |
C/D | 0.7186 | likely_pathogenic | 0.7285 | pathogenic | -0.148 | Destabilizing | 0.528 | D | 0.504 | neutral | None | None | None | None | N |
C/E | 0.8193 | likely_pathogenic | 0.8287 | pathogenic | -0.044 | Destabilizing | 0.771 | D | 0.513 | neutral | None | None | None | None | N |
C/F | 0.1915 | likely_benign | 0.2107 | benign | -1.089 | Destabilizing | 0.98 | D | 0.506 | neutral | N | 0.468873569 | None | None | N |
C/G | 0.1337 | likely_benign | 0.1554 | benign | -2.028 | Highly Destabilizing | 0.001 | N | 0.228 | neutral | N | 0.453718034 | None | None | N |
C/H | 0.4689 | ambiguous | 0.4898 | ambiguous | -1.926 | Destabilizing | 0.986 | D | 0.528 | neutral | None | None | None | None | N |
C/I | 0.4401 | ambiguous | 0.4648 | ambiguous | -0.941 | Destabilizing | 0.9 | D | 0.505 | neutral | None | None | None | None | N |
C/K | 0.7899 | likely_pathogenic | 0.807 | pathogenic | -0.838 | Destabilizing | 0.9 | D | 0.503 | neutral | None | None | None | None | N |
C/L | 0.4058 | ambiguous | 0.4211 | ambiguous | -0.941 | Destabilizing | 0.65 | D | 0.404 | neutral | None | None | None | None | N |
C/M | 0.5141 | ambiguous | 0.5381 | ambiguous | -0.082 | Destabilizing | 0.995 | D | 0.489 | neutral | None | None | None | None | N |
C/N | 0.3024 | likely_benign | 0.3399 | benign | -0.852 | Destabilizing | 0.706 | D | 0.509 | neutral | None | None | None | None | N |
C/P | 0.9787 | likely_pathogenic | 0.9772 | pathogenic | -1.176 | Destabilizing | 0.888 | D | 0.549 | neutral | None | None | None | None | N |
C/Q | 0.5523 | ambiguous | 0.5801 | pathogenic | -0.744 | Destabilizing | 0.96 | D | 0.549 | neutral | None | None | None | None | N |
C/R | 0.5268 | ambiguous | 0.5444 | ambiguous | -0.693 | Destabilizing | 0.96 | D | 0.555 | neutral | N | 0.444461046 | None | None | N |
C/S | 0.1624 | likely_benign | 0.1935 | benign | -1.433 | Destabilizing | 0.03 | N | 0.197 | neutral | N | 0.442652892 | None | None | N |
C/T | 0.3312 | likely_benign | 0.372 | ambiguous | -1.141 | Destabilizing | 0.003 | N | 0.193 | neutral | None | None | None | None | N |
C/V | 0.3798 | ambiguous | 0.3938 | ambiguous | -1.176 | Destabilizing | 0.628 | D | 0.428 | neutral | None | None | None | None | N |
C/W | 0.5786 | likely_pathogenic | 0.5929 | pathogenic | -1.054 | Destabilizing | 0.998 | D | 0.478 | neutral | D | 0.523289976 | None | None | N |
C/Y | 0.2944 | likely_benign | 0.3198 | benign | -1.046 | Destabilizing | 0.993 | D | 0.511 | neutral | D | 0.523116617 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.