Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25675 | 77248;77249;77250 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
N2AB | 24034 | 72325;72326;72327 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
N2A | 23107 | 69544;69545;69546 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
N2B | 16610 | 50053;50054;50055 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
Novex-1 | 16735 | 50428;50429;50430 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
Novex-2 | 16802 | 50629;50630;50631 | chr2:178569109;178569108;178569107 | chr2:179433836;179433835;179433834 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.18 | D | 0.314 | 0.243 | 0.582797214371 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9233 | likely_pathogenic | 0.9355 | pathogenic | -2.483 | Highly Destabilizing | 0.994 | D | 0.65 | neutral | D | 0.564494083 | None | None | N |
V/C | 0.9771 | likely_pathogenic | 0.9802 | pathogenic | -2.05 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -3.554 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.657343424 | None | None | N |
V/E | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/F | 0.9386 | likely_pathogenic | 0.9539 | pathogenic | -1.37 | Destabilizing | 0.999 | D | 0.828 | deleterious | D | 0.587371278 | None | None | N |
V/G | 0.9735 | likely_pathogenic | 0.9749 | pathogenic | -3.041 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.657343424 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -2.89 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.0981 | likely_benign | 0.1068 | benign | -0.852 | Destabilizing | 0.18 | N | 0.314 | neutral | D | 0.533121046 | None | None | N |
V/K | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -2.154 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/L | 0.7573 | likely_pathogenic | 0.8034 | pathogenic | -0.852 | Destabilizing | 0.849 | D | 0.595 | neutral | D | 0.542333996 | None | None | N |
V/M | 0.8321 | likely_pathogenic | 0.8623 | pathogenic | -1.136 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
V/N | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -2.762 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/P | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/Q | 0.9974 | likely_pathogenic | 0.9975 | pathogenic | -2.459 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/R | 0.9967 | likely_pathogenic | 0.9968 | pathogenic | -2.115 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
V/S | 0.9867 | likely_pathogenic | 0.9878 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/T | 0.9568 | likely_pathogenic | 0.9622 | pathogenic | -2.814 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -1.985 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.9959 | likely_pathogenic | 0.9966 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.