Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25683 | 77272;77273;77274 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
N2AB | 24042 | 72349;72350;72351 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
N2A | 23115 | 69568;69569;69570 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
N2B | 16618 | 50077;50078;50079 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
Novex-1 | 16743 | 50452;50453;50454 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
Novex-2 | 16810 | 50653;50654;50655 | chr2:178569085;178569084;178569083 | chr2:179433812;179433811;179433810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs375611562 | -1.308 | 0.073 | N | 0.583 | 0.215 | 0.424549175451 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/F | rs375611562 | -1.308 | 0.073 | N | 0.583 | 0.215 | 0.424549175451 | gnomAD-4.0.0 | 1.36873E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73611E-04 | 0 | 0 | 1.65717E-05 |
I/M | rs755225678 | -0.533 | None | N | 0.339 | 0.072 | 0.19670166235 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/M | rs755225678 | -0.533 | None | N | 0.339 | 0.072 | 0.19670166235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs755225678 | -0.533 | None | N | 0.339 | 0.072 | 0.19670166235 | gnomAD-4.0.0 | 4.06001E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.81989E-06 | 0 | 0 |
I/S | None | None | 0.283 | N | 0.635 | 0.35 | 0.640388181781 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77516E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1707153104 | None | 0.033 | N | 0.563 | 0.255 | 0.525049811399 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85981E-06 | 0 | 0 |
I/V | rs375611562 | -0.862 | None | N | 0.211 | 0.065 | None | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | I | None | 2.0668E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs375611562 | -0.862 | None | N | 0.211 | 0.065 | None | gnomAD-3.1.2 | 7.89E-05 | None | None | None | None | I | None | 2.65418E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs375611562 | -0.862 | None | N | 0.211 | 0.065 | None | gnomAD-4.0.0 | 1.17771E-05 | None | None | None | None | I | None | 2.40372E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47767E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2206 | likely_benign | 0.2273 | benign | -1.015 | Destabilizing | 0.03 | N | 0.495 | neutral | None | None | None | None | I |
I/C | 0.6199 | likely_pathogenic | 0.6483 | pathogenic | -0.864 | Destabilizing | 0.924 | D | 0.59 | neutral | None | None | None | None | I |
I/D | 0.8314 | likely_pathogenic | 0.8221 | pathogenic | -0.269 | Destabilizing | 0.514 | D | 0.661 | neutral | None | None | None | None | I |
I/E | 0.697 | likely_pathogenic | 0.6927 | pathogenic | -0.341 | Destabilizing | 0.439 | N | 0.657 | neutral | None | None | None | None | I |
I/F | 0.1832 | likely_benign | 0.2049 | benign | -0.915 | Destabilizing | 0.073 | N | 0.583 | neutral | N | 0.494891089 | None | None | I |
I/G | 0.6694 | likely_pathogenic | 0.6709 | pathogenic | -1.213 | Destabilizing | 0.343 | N | 0.649 | neutral | None | None | None | None | I |
I/H | 0.6241 | likely_pathogenic | 0.64 | pathogenic | -0.377 | Destabilizing | 0.835 | D | 0.655 | neutral | None | None | None | None | I |
I/K | 0.4978 | ambiguous | 0.4934 | ambiguous | -0.454 | Destabilizing | 0.015 | N | 0.651 | neutral | None | None | None | None | I |
I/L | 0.1281 | likely_benign | 0.1337 | benign | -0.6 | Destabilizing | None | N | 0.195 | neutral | N | 0.508320523 | None | None | I |
I/M | 0.1154 | likely_benign | 0.1234 | benign | -0.509 | Destabilizing | None | N | 0.339 | neutral | N | 0.506917801 | None | None | I |
I/N | 0.4411 | ambiguous | 0.4201 | ambiguous | -0.29 | Destabilizing | 0.444 | N | 0.662 | neutral | N | 0.489749301 | None | None | I |
I/P | 0.5135 | ambiguous | 0.5315 | ambiguous | -0.704 | Destabilizing | 0.763 | D | 0.663 | neutral | None | None | None | None | I |
I/Q | 0.5281 | ambiguous | 0.5425 | ambiguous | -0.551 | Destabilizing | 0.178 | N | 0.665 | neutral | None | None | None | None | I |
I/R | 0.3666 | ambiguous | 0.3705 | ambiguous | 0.142 | Stabilizing | 0.172 | N | 0.663 | neutral | None | None | None | None | I |
I/S | 0.3253 | likely_benign | 0.3132 | benign | -0.86 | Destabilizing | 0.283 | N | 0.635 | neutral | N | 0.518364159 | None | None | I |
I/T | 0.1281 | likely_benign | 0.132 | benign | -0.82 | Destabilizing | 0.033 | N | 0.563 | neutral | N | 0.508128522 | None | None | I |
I/V | 0.0681 | likely_benign | 0.0663 | benign | -0.704 | Destabilizing | None | N | 0.211 | neutral | N | 0.437556503 | None | None | I |
I/W | 0.752 | likely_pathogenic | 0.7933 | pathogenic | -0.86 | Destabilizing | 0.948 | D | 0.693 | prob.neutral | None | None | None | None | I |
I/Y | 0.5825 | likely_pathogenic | 0.6073 | pathogenic | -0.616 | Destabilizing | 0.047 | N | 0.609 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.