Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25694 | 77305;77306;77307 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
N2AB | 24053 | 72382;72383;72384 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
N2A | 23126 | 69601;69602;69603 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
N2B | 16629 | 50110;50111;50112 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
Novex-1 | 16754 | 50485;50486;50487 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
Novex-2 | 16821 | 50686;50687;50688 | chr2:178569052;178569051;178569050 | chr2:179433779;179433778;179433777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs757757476 | 0.207 | 0.999 | N | 0.806 | 0.176 | 0.149567049428 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/N | rs757757476 | 0.207 | 0.999 | N | 0.806 | 0.176 | 0.149567049428 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43402E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7113 | likely_pathogenic | 0.7322 | pathogenic | -0.132 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
K/C | 0.8471 | likely_pathogenic | 0.8539 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/D | 0.9473 | likely_pathogenic | 0.9529 | pathogenic | 0.347 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
K/E | 0.6763 | likely_pathogenic | 0.6875 | pathogenic | 0.382 | Stabilizing | 0.994 | D | 0.764 | deleterious | N | 0.460525323 | None | None | N |
K/F | 0.9269 | likely_pathogenic | 0.935 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
K/G | 0.8969 | likely_pathogenic | 0.9065 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.689 | prob.delet. | None | None | None | None | N |
K/H | 0.5397 | ambiguous | 0.5657 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/I | 0.5105 | ambiguous | 0.5123 | ambiguous | 0.422 | Stabilizing | 0.987 | D | 0.797 | deleterious | None | None | None | None | N |
K/L | 0.5108 | ambiguous | 0.5269 | ambiguous | 0.422 | Stabilizing | 0.987 | D | 0.689 | prob.delet. | None | None | None | None | N |
K/M | 0.4207 | ambiguous | 0.4288 | ambiguous | 0.205 | Stabilizing | 0.999 | D | 0.777 | deleterious | N | 0.465867694 | None | None | N |
K/N | 0.8402 | likely_pathogenic | 0.854 | pathogenic | 0.111 | Stabilizing | 0.999 | D | 0.806 | deleterious | N | 0.466374673 | None | None | N |
K/P | 0.8557 | likely_pathogenic | 0.8794 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
K/Q | 0.3227 | likely_benign | 0.3403 | ambiguous | -0.027 | Destabilizing | 0.996 | D | 0.809 | deleterious | N | 0.516398502 | None | None | N |
K/R | 0.0907 | likely_benign | 0.0952 | benign | -0.08 | Destabilizing | 0.99 | D | 0.717 | prob.delet. | N | 0.502853201 | None | None | N |
K/S | 0.8371 | likely_pathogenic | 0.8505 | pathogenic | -0.491 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
K/T | 0.3761 | ambiguous | 0.3943 | ambiguous | -0.284 | Destabilizing | 0.998 | D | 0.795 | deleterious | N | 0.443078887 | None | None | N |
K/V | 0.4692 | ambiguous | 0.4775 | ambiguous | 0.267 | Stabilizing | 0.99 | D | 0.769 | deleterious | None | None | None | None | N |
K/W | 0.9014 | likely_pathogenic | 0.9131 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
K/Y | 0.8592 | likely_pathogenic | 0.8707 | pathogenic | 0.148 | Stabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.