Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25701 | 77326;77327;77328 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
N2AB | 24060 | 72403;72404;72405 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
N2A | 23133 | 69622;69623;69624 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
N2B | 16636 | 50131;50132;50133 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
Novex-1 | 16761 | 50506;50507;50508 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
Novex-2 | 16828 | 50707;50708;50709 | chr2:178569031;178569030;178569029 | chr2:179433758;179433757;179433756 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs374033036 | -0.893 | 1.0 | N | 0.914 | 0.542 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 1.29299E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs374033036 | -0.893 | 1.0 | N | 0.914 | 0.542 | None | gnomAD-4.0.0 | 3.18486E-06 | None | None | None | None | N | None | 1.13302E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.097 | likely_benign | 0.1099 | benign | -1.613 | Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.517302579 | None | None | N |
P/C | 0.6088 | likely_pathogenic | 0.646 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/D | 0.9425 | likely_pathogenic | 0.9415 | pathogenic | -2.354 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/E | 0.7682 | likely_pathogenic | 0.7815 | pathogenic | -2.366 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/F | 0.8188 | likely_pathogenic | 0.824 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
P/G | 0.6579 | likely_pathogenic | 0.6883 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
P/H | 0.6202 | likely_pathogenic | 0.6189 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.522749169 | None | None | N |
P/I | 0.4928 | ambiguous | 0.5037 | ambiguous | -0.903 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
P/K | 0.7825 | likely_pathogenic | 0.7931 | pathogenic | -1.283 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/L | 0.3459 | ambiguous | 0.3427 | ambiguous | -0.903 | Destabilizing | 1.0 | D | 0.914 | deleterious | N | 0.51772274 | None | None | N |
P/M | 0.5056 | ambiguous | 0.5482 | ambiguous | -0.693 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/N | 0.8153 | likely_pathogenic | 0.8154 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/Q | 0.4795 | ambiguous | 0.5068 | ambiguous | -1.463 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/R | 0.6647 | likely_pathogenic | 0.6759 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.507238581 | None | None | N |
P/S | 0.291 | likely_benign | 0.302 | benign | -1.589 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.497590569 | None | None | N |
P/T | 0.316 | likely_benign | 0.3319 | benign | -1.509 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.517215761 | None | None | N |
P/V | 0.3289 | likely_benign | 0.3497 | ambiguous | -1.109 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/W | 0.9412 | likely_pathogenic | 0.9452 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/Y | 0.8241 | likely_pathogenic | 0.8222 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.