Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25706 | 77341;77342;77343 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
N2AB | 24065 | 72418;72419;72420 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
N2A | 23138 | 69637;69638;69639 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
N2B | 16641 | 50146;50147;50148 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
Novex-1 | 16766 | 50521;50522;50523 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
Novex-2 | 16833 | 50722;50723;50724 | chr2:178569016;178569015;178569014 | chr2:179433743;179433742;179433741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1707111978 | None | 0.001 | N | 0.152 | 0.116 | 0.132336055621 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1049 | likely_benign | 0.09 | benign | -0.82 | Destabilizing | 0.001 | N | 0.152 | neutral | N | 0.515942716 | None | None | I |
T/C | 0.4636 | ambiguous | 0.4248 | ambiguous | -0.542 | Destabilizing | 0.993 | D | 0.565 | neutral | None | None | None | None | I |
T/D | 0.5356 | ambiguous | 0.4835 | ambiguous | 0.21 | Stabilizing | 0.339 | N | 0.526 | neutral | None | None | None | None | I |
T/E | 0.4343 | ambiguous | 0.3808 | ambiguous | 0.228 | Stabilizing | 0.63 | D | 0.495 | neutral | None | None | None | None | I |
T/F | 0.2856 | likely_benign | 0.2383 | benign | -0.998 | Destabilizing | 0.957 | D | 0.625 | neutral | None | None | None | None | I |
T/G | 0.3228 | likely_benign | 0.2892 | benign | -1.074 | Destabilizing | 0.682 | D | 0.532 | neutral | None | None | None | None | I |
T/H | 0.3248 | likely_benign | 0.2872 | benign | -1.34 | Destabilizing | 0.995 | D | 0.598 | neutral | None | None | None | None | I |
T/I | 0.1759 | likely_benign | 0.1371 | benign | -0.236 | Destabilizing | 0.006 | N | 0.323 | neutral | N | 0.469473135 | None | None | I |
T/K | 0.3363 | likely_benign | 0.2797 | benign | -0.503 | Destabilizing | 0.705 | D | 0.524 | neutral | None | None | None | None | I |
T/L | 0.1312 | likely_benign | 0.1081 | benign | -0.236 | Destabilizing | 0.145 | N | 0.461 | neutral | None | None | None | None | I |
T/M | 0.0963 | likely_benign | 0.0836 | benign | -0.066 | Destabilizing | 0.893 | D | 0.579 | neutral | None | None | None | None | I |
T/N | 0.1795 | likely_benign | 0.1542 | benign | -0.552 | Destabilizing | 0.279 | N | 0.462 | neutral | N | 0.494124649 | None | None | I |
T/P | 0.7256 | likely_pathogenic | 0.6622 | pathogenic | -0.398 | Destabilizing | 0.733 | D | 0.592 | neutral | N | 0.489401042 | None | None | I |
T/Q | 0.3172 | likely_benign | 0.2847 | benign | -0.622 | Destabilizing | 0.797 | D | 0.588 | neutral | None | None | None | None | I |
T/R | 0.2798 | likely_benign | 0.2367 | benign | -0.389 | Destabilizing | 0.957 | D | 0.595 | neutral | None | None | None | None | I |
T/S | 0.1275 | likely_benign | 0.1144 | benign | -0.886 | Destabilizing | 0.001 | N | 0.143 | neutral | N | 0.45489147 | None | None | I |
T/V | 0.1342 | likely_benign | 0.1136 | benign | -0.398 | Destabilizing | 0.108 | N | 0.445 | neutral | None | None | None | None | I |
T/W | 0.6642 | likely_pathogenic | 0.6248 | pathogenic | -0.944 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | I |
T/Y | 0.3712 | ambiguous | 0.3314 | benign | -0.678 | Destabilizing | 0.978 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.