Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25707 | 77344;77345;77346 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
N2AB | 24066 | 72421;72422;72423 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
N2A | 23139 | 69640;69641;69642 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
N2B | 16642 | 50149;50150;50151 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
Novex-1 | 16767 | 50524;50525;50526 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
Novex-2 | 16834 | 50725;50726;50727 | chr2:178569013;178569012;178569011 | chr2:179433740;179433739;179433738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.618 | N | 0.38 | 0.208 | 0.29132392195 | gnomAD-4.0.0 | 6.84395E-07 | None | None | None | None | I | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1192473018 | -0.596 | 0.825 | N | 0.323 | 0.293 | 0.364730456448 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs1192473018 | -0.596 | 0.825 | N | 0.323 | 0.293 | 0.364730456448 | gnomAD-4.0.0 | 6.84395E-07 | None | None | None | None | I | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.428 | ambiguous | 0.3552 | ambiguous | -1.502 | Destabilizing | 0.958 | D | 0.53 | neutral | N | 0.509958106 | None | None | I |
V/C | 0.9158 | likely_pathogenic | 0.8945 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
V/D | 0.9774 | likely_pathogenic | 0.9669 | pathogenic | -0.648 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | I |
V/E | 0.9363 | likely_pathogenic | 0.9199 | pathogenic | -0.585 | Destabilizing | 0.994 | D | 0.799 | deleterious | N | 0.521360499 | None | None | I |
V/F | 0.5781 | likely_pathogenic | 0.511 | ambiguous | -1.065 | Destabilizing | 0.991 | D | 0.8 | deleterious | None | None | None | None | I |
V/G | 0.7711 | likely_pathogenic | 0.7173 | pathogenic | -1.875 | Destabilizing | 0.994 | D | 0.787 | deleterious | N | 0.520346541 | None | None | I |
V/H | 0.975 | likely_pathogenic | 0.9663 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
V/I | 0.0984 | likely_benign | 0.0909 | benign | -0.559 | Destabilizing | 0.862 | D | 0.577 | neutral | None | None | None | None | I |
V/K | 0.9369 | likely_pathogenic | 0.9234 | pathogenic | -1.154 | Destabilizing | 0.991 | D | 0.781 | deleterious | None | None | None | None | I |
V/L | 0.4146 | ambiguous | 0.3415 | ambiguous | -0.559 | Destabilizing | 0.618 | D | 0.38 | neutral | N | 0.455569048 | None | None | I |
V/M | 0.3221 | likely_benign | 0.2635 | benign | -0.683 | Destabilizing | 0.825 | D | 0.323 | neutral | N | 0.484138031 | None | None | I |
V/N | 0.9423 | likely_pathogenic | 0.9152 | pathogenic | -1.132 | Destabilizing | 0.995 | D | 0.851 | deleterious | None | None | None | None | I |
V/P | 0.8557 | likely_pathogenic | 0.8176 | pathogenic | -0.839 | Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | I |
V/Q | 0.9243 | likely_pathogenic | 0.9036 | pathogenic | -1.135 | Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | I |
V/R | 0.9104 | likely_pathogenic | 0.8948 | pathogenic | -0.807 | Destabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | I |
V/S | 0.7946 | likely_pathogenic | 0.7316 | pathogenic | -1.848 | Destabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | I |
V/T | 0.5208 | ambiguous | 0.4687 | ambiguous | -1.63 | Destabilizing | 0.968 | D | 0.619 | neutral | None | None | None | None | I |
V/W | 0.9703 | likely_pathogenic | 0.9613 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/Y | 0.9357 | likely_pathogenic | 0.9161 | pathogenic | -0.904 | Destabilizing | 0.995 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.