Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2571 | 7936;7937;7938 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
N2AB | 2571 | 7936;7937;7938 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
N2A | 2571 | 7936;7937;7938 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
N2B | 2525 | 7798;7799;7800 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
Novex-1 | 2525 | 7798;7799;7800 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
Novex-2 | 2525 | 7798;7799;7800 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
Novex-3 | 2571 | 7936;7937;7938 | chr2:178773253;178773252;178773251 | chr2:179637980;179637979;179637978 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs149660690 | -0.117 | 0.029 | N | 0.314 | 0.203 | None | gnomAD-2.1.1 | 5.68E-05 | None | None | None | None | N | None | 6.06208E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.77E-06 | 0 |
E/K | rs149660690 | -0.117 | 0.029 | N | 0.314 | 0.203 | None | gnomAD-3.1.2 | 1.6442E-04 | None | None | None | None | N | None | 5.5577E-04 | 1.31027E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs149660690 | -0.117 | 0.029 | N | 0.314 | 0.203 | None | 1000 genomes | 1.19808E-03 | None | None | None | None | N | None | 4.5E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs149660690 | -0.117 | 0.029 | N | 0.314 | 0.203 | None | gnomAD-4.0.0 | 3.34608E-05 | None | None | None | None | N | None | 5.33476E-04 | 3.33489E-05 | None | 0 | 0 | None | 0 | 0 | 4.23752E-06 | 0 | 1.12011E-04 |
E/V | None | None | 0.029 | N | 0.39 | 0.24 | 0.484037581386 | gnomAD-4.0.0 | 1.59096E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77778E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1249 | likely_benign | 0.121 | benign | -0.505 | Destabilizing | 0.012 | N | 0.318 | neutral | N | 0.511476828 | None | None | N |
E/C | 0.8195 | likely_pathogenic | 0.8105 | pathogenic | -0.312 | Destabilizing | 0.864 | D | 0.389 | neutral | None | None | None | None | N |
E/D | 0.1783 | likely_benign | 0.1697 | benign | -0.442 | Destabilizing | 0.024 | N | 0.312 | neutral | D | 0.583316423 | None | None | N |
E/F | 0.7276 | likely_pathogenic | 0.6979 | pathogenic | -0.204 | Destabilizing | 0.214 | N | 0.412 | neutral | None | None | None | None | N |
E/G | 0.2087 | likely_benign | 0.1888 | benign | -0.733 | Destabilizing | None | N | 0.192 | neutral | D | 0.653133125 | None | None | N |
E/H | 0.5093 | ambiguous | 0.4984 | ambiguous | 0.05 | Stabilizing | 0.356 | N | 0.359 | neutral | None | None | None | None | N |
E/I | 0.2346 | likely_benign | 0.2221 | benign | 0.074 | Stabilizing | 0.12 | N | 0.419 | neutral | None | None | None | None | N |
E/K | 0.1566 | likely_benign | 0.1492 | benign | 0.031 | Stabilizing | 0.029 | N | 0.314 | neutral | N | 0.503019816 | None | None | N |
E/L | 0.3097 | likely_benign | 0.2995 | benign | 0.074 | Stabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
E/M | 0.3654 | ambiguous | 0.3519 | ambiguous | 0.1 | Stabilizing | 0.214 | N | 0.387 | neutral | None | None | None | None | N |
E/N | 0.2701 | likely_benign | 0.2528 | benign | -0.374 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | N |
E/P | 0.2345 | likely_benign | 0.2372 | benign | -0.099 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
E/Q | 0.1411 | likely_benign | 0.1393 | benign | -0.301 | Destabilizing | 0.002 | N | 0.188 | neutral | N | 0.501624763 | None | None | N |
E/R | 0.2784 | likely_benign | 0.2744 | benign | 0.351 | Stabilizing | 0.072 | N | 0.336 | neutral | None | None | None | None | N |
E/S | 0.241 | likely_benign | 0.227 | benign | -0.542 | Destabilizing | 0.038 | N | 0.271 | neutral | None | None | None | None | N |
E/T | 0.2052 | likely_benign | 0.1916 | benign | -0.353 | Destabilizing | 0.072 | N | 0.343 | neutral | None | None | None | None | N |
E/V | 0.1453 | likely_benign | 0.1374 | benign | -0.099 | Destabilizing | 0.029 | N | 0.39 | neutral | N | 0.512413766 | None | None | N |
E/W | 0.8891 | likely_pathogenic | 0.8774 | pathogenic | -0.003 | Destabilizing | 0.864 | D | 0.418 | neutral | None | None | None | None | N |
E/Y | 0.6048 | likely_pathogenic | 0.5743 | pathogenic | 0.035 | Stabilizing | 0.628 | D | 0.397 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.