Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25716 | 77371;77372;77373 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
N2AB | 24075 | 72448;72449;72450 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
N2A | 23148 | 69667;69668;69669 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
N2B | 16651 | 50176;50177;50178 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
Novex-1 | 16776 | 50551;50552;50553 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
Novex-2 | 16843 | 50752;50753;50754 | chr2:178568986;178568985;178568984 | chr2:179433713;179433712;179433711 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | N | 0.733 | 0.455 | 0.339316883193 | gnomAD-4.0.0 | 6.84348E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99614E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.105 | likely_benign | 0.0928 | benign | -0.759 | Destabilizing | 0.988 | D | 0.519 | neutral | N | 0.494335293 | None | None | N |
S/C | 0.1235 | likely_benign | 0.1073 | benign | -0.79 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.475220353 | None | None | N |
S/D | 0.6883 | likely_pathogenic | 0.6187 | pathogenic | -1.035 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
S/E | 0.7185 | likely_pathogenic | 0.6471 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
S/F | 0.217 | likely_benign | 0.1405 | benign | -0.965 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.523850123 | None | None | N |
S/G | 0.1722 | likely_benign | 0.161 | benign | -1.026 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
S/H | 0.3818 | ambiguous | 0.3108 | benign | -1.546 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
S/I | 0.177 | likely_benign | 0.1416 | benign | -0.146 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/K | 0.7478 | likely_pathogenic | 0.6821 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
S/L | 0.1076 | likely_benign | 0.0903 | benign | -0.146 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/M | 0.1912 | likely_benign | 0.1616 | benign | 0.05 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
S/N | 0.2174 | likely_benign | 0.197 | benign | -0.919 | Destabilizing | 0.998 | D | 0.612 | neutral | None | None | None | None | N |
S/P | 0.9526 | likely_pathogenic | 0.9045 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.493071118 | None | None | N |
S/Q | 0.5736 | likely_pathogenic | 0.4985 | ambiguous | -1.057 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/R | 0.653 | likely_pathogenic | 0.5775 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/T | 0.0751 | likely_benign | 0.0719 | benign | -0.798 | Destabilizing | 0.997 | D | 0.573 | neutral | N | 0.383530017 | None | None | N |
S/V | 0.1925 | likely_benign | 0.1569 | benign | -0.317 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/W | 0.4255 | ambiguous | 0.299 | benign | -1.008 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
S/Y | 0.2436 | likely_benign | 0.1699 | benign | -0.672 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.521156535 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.