Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25718 | 77377;77378;77379 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
N2AB | 24077 | 72454;72455;72456 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
N2A | 23150 | 69673;69674;69675 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
N2B | 16653 | 50182;50183;50184 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
Novex-1 | 16778 | 50557;50558;50559 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
Novex-2 | 16845 | 50758;50759;50760 | chr2:178568980;178568979;178568978 | chr2:179433707;179433706;179433705 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs1439934941 | 0.375 | 0.999 | N | 0.615 | 0.414 | 0.50685403127 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/I | rs1439934941 | 0.375 | 0.999 | N | 0.615 | 0.414 | 0.50685403127 | gnomAD-4.0.0 | 6.57748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47115E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0855 | likely_benign | 0.0798 | benign | -0.742 | Destabilizing | 0.034 | N | 0.194 | neutral | None | None | None | None | N |
S/C | 0.0961 | likely_benign | 0.0893 | benign | -0.605 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.508206994 | None | None | N |
S/D | 0.5434 | ambiguous | 0.4967 | ambiguous | -1.027 | Destabilizing | 0.994 | D | 0.427 | neutral | None | None | None | None | N |
S/E | 0.5733 | likely_pathogenic | 0.5273 | ambiguous | -0.917 | Destabilizing | 0.98 | D | 0.361 | neutral | None | None | None | None | N |
S/F | 0.2158 | likely_benign | 0.1934 | benign | -0.765 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
S/G | 0.1089 | likely_benign | 0.1009 | benign | -1.084 | Destabilizing | 0.98 | D | 0.361 | neutral | N | 0.491797806 | None | None | N |
S/H | 0.248 | likely_benign | 0.2287 | benign | -1.585 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
S/I | 0.1611 | likely_benign | 0.147 | benign | 0.089 | Stabilizing | 0.999 | D | 0.615 | neutral | N | 0.503180565 | None | None | N |
S/K | 0.5581 | ambiguous | 0.5222 | ambiguous | -0.476 | Destabilizing | 0.638 | D | 0.164 | neutral | None | None | None | None | N |
S/L | 0.1108 | likely_benign | 0.0999 | benign | 0.089 | Stabilizing | 0.997 | D | 0.489 | neutral | None | None | None | None | N |
S/M | 0.1741 | likely_benign | 0.1712 | benign | 0.17 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
S/N | 0.1346 | likely_benign | 0.1228 | benign | -0.891 | Destabilizing | 0.938 | D | 0.453 | neutral | D | 0.528605369 | None | None | N |
S/P | 0.9687 | likely_pathogenic | 0.9586 | pathogenic | -0.152 | Destabilizing | 0.994 | D | 0.578 | neutral | None | None | None | None | N |
S/Q | 0.4041 | ambiguous | 0.3844 | ambiguous | -0.833 | Destabilizing | 0.997 | D | 0.487 | neutral | None | None | None | None | N |
S/R | 0.4408 | ambiguous | 0.3973 | ambiguous | -0.654 | Destabilizing | 0.425 | N | 0.379 | neutral | N | 0.475526749 | None | None | N |
S/T | 0.0748 | likely_benign | 0.0736 | benign | -0.673 | Destabilizing | 0.09 | N | 0.196 | neutral | N | 0.504765717 | None | None | N |
S/V | 0.1841 | likely_benign | 0.1701 | benign | -0.152 | Destabilizing | 0.992 | D | 0.523 | neutral | None | None | None | None | N |
S/W | 0.4057 | ambiguous | 0.3694 | ambiguous | -0.913 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/Y | 0.2186 | likely_benign | 0.1966 | benign | -0.523 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.