Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2572 | 7939;7940;7941 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
N2AB | 2572 | 7939;7940;7941 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
N2A | 2572 | 7939;7940;7941 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
N2B | 2526 | 7801;7802;7803 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
Novex-1 | 2526 | 7801;7802;7803 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
Novex-2 | 2526 | 7801;7802;7803 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
Novex-3 | 2572 | 7939;7940;7941 | chr2:178773250;178773249;178773248 | chr2:179637977;179637976;179637975 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs749818939 | -1.133 | 0.171 | D | 0.589 | 0.187 | 0.239305524855 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/M | rs749818939 | -1.133 | 0.171 | D | 0.589 | 0.187 | 0.239305524855 | gnomAD-4.0.0 | 3.42082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.79764E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8586 | likely_pathogenic | 0.8676 | pathogenic | -2.434 | Highly Destabilizing | 0.016 | N | 0.448 | neutral | None | None | None | None | N |
I/C | 0.9049 | likely_pathogenic | 0.9067 | pathogenic | -1.675 | Destabilizing | 0.628 | D | 0.639 | neutral | None | None | None | None | N |
I/D | 0.9874 | likely_pathogenic | 0.9864 | pathogenic | -2.785 | Highly Destabilizing | 0.038 | N | 0.651 | neutral | None | None | None | None | N |
I/E | 0.9573 | likely_pathogenic | 0.9545 | pathogenic | -2.557 | Highly Destabilizing | 0.038 | N | 0.639 | neutral | None | None | None | None | N |
I/F | 0.4729 | ambiguous | 0.4435 | ambiguous | -1.547 | Destabilizing | 0.029 | N | 0.548 | neutral | D | 0.669784217 | None | None | N |
I/G | 0.9666 | likely_pathogenic | 0.9688 | pathogenic | -2.964 | Highly Destabilizing | 0.038 | N | 0.619 | neutral | None | None | None | None | N |
I/H | 0.9538 | likely_pathogenic | 0.9486 | pathogenic | -2.41 | Highly Destabilizing | 0.214 | N | 0.652 | neutral | None | None | None | None | N |
I/K | 0.9098 | likely_pathogenic | 0.9044 | pathogenic | -1.941 | Destabilizing | 0.038 | N | 0.633 | neutral | None | None | None | None | N |
I/L | 0.0774 | likely_benign | 0.0803 | benign | -0.902 | Destabilizing | None | N | 0.085 | neutral | N | 0.454773622 | None | None | N |
I/M | 0.1457 | likely_benign | 0.1434 | benign | -0.782 | Destabilizing | 0.171 | N | 0.589 | neutral | D | 0.576059896 | None | None | N |
I/N | 0.869 | likely_pathogenic | 0.8597 | pathogenic | -2.278 | Highly Destabilizing | None | N | 0.471 | neutral | D | 0.671295168 | None | None | N |
I/P | 0.9686 | likely_pathogenic | 0.9688 | pathogenic | -1.394 | Destabilizing | 0.356 | N | 0.697 | prob.neutral | None | None | None | None | N |
I/Q | 0.9181 | likely_pathogenic | 0.9113 | pathogenic | -2.141 | Highly Destabilizing | 0.214 | N | 0.681 | prob.neutral | None | None | None | None | N |
I/R | 0.8816 | likely_pathogenic | 0.8754 | pathogenic | -1.696 | Destabilizing | 0.214 | N | 0.697 | prob.neutral | None | None | None | None | N |
I/S | 0.9211 | likely_pathogenic | 0.917 | pathogenic | -2.934 | Highly Destabilizing | 0.029 | N | 0.601 | neutral | D | 0.67042108 | None | None | N |
I/T | 0.8664 | likely_pathogenic | 0.8679 | pathogenic | -2.552 | Highly Destabilizing | 0.012 | N | 0.533 | neutral | D | 0.625764503 | None | None | N |
I/V | 0.1576 | likely_benign | 0.1563 | benign | -1.394 | Destabilizing | None | N | 0.105 | neutral | N | 0.511025572 | None | None | N |
I/W | 0.9455 | likely_pathogenic | 0.938 | pathogenic | -1.909 | Destabilizing | 0.864 | D | 0.661 | neutral | None | None | None | None | N |
I/Y | 0.8413 | likely_pathogenic | 0.8286 | pathogenic | -1.594 | Destabilizing | 0.356 | N | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.