Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25720 | 77383;77384;77385 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
N2AB | 24079 | 72460;72461;72462 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
N2A | 23152 | 69679;69680;69681 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
N2B | 16655 | 50188;50189;50190 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
Novex-1 | 16780 | 50563;50564;50565 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
Novex-2 | 16847 | 50764;50765;50766 | chr2:178568974;178568973;178568972 | chr2:179433701;179433700;179433699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs748079783 | -0.714 | None | N | 0.176 | 0.12 | 0.162503812791 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.89E-06 | 0 |
T/A | rs748079783 | -0.714 | None | N | 0.176 | 0.12 | 0.162503812791 | gnomAD-4.0.0 | 2.05306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 1.15969E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0692 | likely_benign | 0.0727 | benign | -0.832 | Destabilizing | None | N | 0.176 | neutral | N | 0.490180267 | None | None | N |
T/C | 0.338 | likely_benign | 0.3478 | ambiguous | -0.544 | Destabilizing | 0.951 | D | 0.522 | neutral | None | None | None | None | N |
T/D | 0.2676 | likely_benign | 0.2679 | benign | -0.149 | Destabilizing | 0.129 | N | 0.394 | neutral | None | None | None | None | N |
T/E | 0.1647 | likely_benign | 0.1618 | benign | -0.106 | Destabilizing | None | N | 0.266 | neutral | None | None | None | None | N |
T/F | 0.25 | likely_benign | 0.2449 | benign | -0.826 | Destabilizing | 0.836 | D | 0.549 | neutral | None | None | None | None | N |
T/G | 0.1631 | likely_benign | 0.1667 | benign | -1.128 | Destabilizing | 0.129 | N | 0.393 | neutral | None | None | None | None | N |
T/H | 0.2577 | likely_benign | 0.2514 | benign | -1.344 | Destabilizing | 0.836 | D | 0.535 | neutral | None | None | None | None | N |
T/I | 0.1429 | likely_benign | 0.1369 | benign | -0.124 | Destabilizing | 0.351 | N | 0.553 | neutral | N | 0.504976361 | None | None | N |
T/K | 0.1991 | likely_benign | 0.1911 | benign | -0.693 | Destabilizing | 0.101 | N | 0.397 | neutral | N | 0.462145516 | None | None | N |
T/L | 0.074 | likely_benign | 0.0715 | benign | -0.124 | Destabilizing | 0.129 | N | 0.403 | neutral | None | None | None | None | N |
T/M | 0.0723 | likely_benign | 0.0711 | benign | 0.004 | Stabilizing | 0.94 | D | 0.537 | neutral | None | None | None | None | N |
T/N | 0.0917 | likely_benign | 0.0909 | benign | -0.783 | Destabilizing | 0.418 | N | 0.341 | neutral | None | None | None | None | N |
T/P | 0.1966 | likely_benign | 0.174 | benign | -0.326 | Destabilizing | 0.523 | D | 0.542 | neutral | N | 0.508651384 | None | None | N |
T/Q | 0.153 | likely_benign | 0.1526 | benign | -0.815 | Destabilizing | 0.264 | N | 0.466 | neutral | None | None | None | None | N |
T/R | 0.1944 | likely_benign | 0.1833 | benign | -0.561 | Destabilizing | 0.351 | N | 0.466 | neutral | N | 0.482195502 | None | None | N |
T/S | 0.0902 | likely_benign | 0.0917 | benign | -1.071 | Destabilizing | 0.101 | N | 0.271 | neutral | N | 0.471149002 | None | None | N |
T/V | 0.1035 | likely_benign | 0.103 | benign | -0.326 | Destabilizing | 0.129 | N | 0.331 | neutral | None | None | None | None | N |
T/W | 0.5786 | likely_pathogenic | 0.562 | ambiguous | -0.812 | Destabilizing | 0.983 | D | 0.551 | neutral | None | None | None | None | N |
T/Y | 0.2896 | likely_benign | 0.2832 | benign | -0.551 | Destabilizing | 0.94 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.