Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25729 | 77410;77411;77412 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
N2AB | 24088 | 72487;72488;72489 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
N2A | 23161 | 69706;69707;69708 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
N2B | 16664 | 50215;50216;50217 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
Novex-1 | 16789 | 50590;50591;50592 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
Novex-2 | 16856 | 50791;50792;50793 | chr2:178568947;178568946;178568945 | chr2:179433674;179433673;179433672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs531490944 | 0.243 | 0.98 | N | 0.535 | 0.244 | 0.247322355667 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.28863E-04 | None | 0 | 0 | 0 |
K/N | rs531490944 | 0.243 | 0.98 | N | 0.535 | 0.244 | 0.247322355667 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
K/N | rs531490944 | 0.243 | 0.98 | N | 0.535 | 0.244 | 0.247322355667 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
K/N | rs531490944 | 0.243 | 0.98 | N | 0.535 | 0.244 | 0.247322355667 | gnomAD-4.0.0 | 1.36354E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.30622E-04 | 1.60097E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6646 | likely_pathogenic | 0.7238 | pathogenic | -0.05 | Destabilizing | 0.97 | D | 0.602 | neutral | None | None | None | None | I |
K/C | 0.8713 | likely_pathogenic | 0.8872 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/D | 0.8972 | likely_pathogenic | 0.9175 | pathogenic | 0.121 | Stabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | I |
K/E | 0.6059 | likely_pathogenic | 0.6595 | pathogenic | 0.149 | Stabilizing | 0.961 | D | 0.555 | neutral | N | 0.466607187 | None | None | I |
K/F | 0.9507 | likely_pathogenic | 0.962 | pathogenic | -0.15 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/G | 0.7857 | likely_pathogenic | 0.8114 | pathogenic | -0.282 | Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | I |
K/H | 0.5104 | ambiguous | 0.5522 | ambiguous | -0.53 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
K/I | 0.7034 | likely_pathogenic | 0.7462 | pathogenic | 0.491 | Stabilizing | 0.998 | D | 0.7 | prob.neutral | N | 0.517134794 | None | None | I |
K/L | 0.6922 | likely_pathogenic | 0.7287 | pathogenic | 0.491 | Stabilizing | 0.97 | D | 0.635 | neutral | None | None | None | None | I |
K/M | 0.6193 | likely_pathogenic | 0.6662 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
K/N | 0.7937 | likely_pathogenic | 0.8321 | pathogenic | 0.135 | Stabilizing | 0.98 | D | 0.535 | neutral | N | 0.48590781 | None | None | I |
K/P | 0.7183 | likely_pathogenic | 0.7375 | pathogenic | 0.34 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | I |
K/Q | 0.3149 | likely_benign | 0.3587 | ambiguous | None | Stabilizing | 0.961 | D | 0.569 | neutral | N | 0.500645189 | None | None | I |
K/R | 0.0685 | likely_benign | 0.0686 | benign | -0.1 | Destabilizing | 0.031 | N | 0.127 | neutral | N | 0.422685838 | None | None | I |
K/S | 0.7961 | likely_pathogenic | 0.8366 | pathogenic | -0.378 | Destabilizing | 0.985 | D | 0.531 | neutral | None | None | None | None | I |
K/T | 0.5439 | ambiguous | 0.6051 | pathogenic | -0.187 | Destabilizing | 0.98 | D | 0.595 | neutral | N | 0.495892731 | None | None | I |
K/V | 0.6159 | likely_pathogenic | 0.6679 | pathogenic | 0.34 | Stabilizing | 0.996 | D | 0.615 | neutral | None | None | None | None | I |
K/W | 0.9144 | likely_pathogenic | 0.9274 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
K/Y | 0.8741 | likely_pathogenic | 0.8903 | pathogenic | 0.194 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.