Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25732 | 77419;77420;77421 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
N2AB | 24091 | 72496;72497;72498 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
N2A | 23164 | 69715;69716;69717 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
N2B | 16667 | 50224;50225;50226 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
Novex-1 | 16792 | 50599;50600;50601 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
Novex-2 | 16859 | 50800;50801;50802 | chr2:178568938;178568937;178568936 | chr2:179433665;179433664;179433663 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.007 | N | 0.155 | 0.143 | 0.139678290688 | gnomAD-4.0.0 | 6.84347E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
Q/R | rs779015495 | 0.004 | 0.837 | N | 0.447 | 0.225 | 0.19670166235 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs779015495 | 0.004 | 0.837 | N | 0.447 | 0.225 | 0.19670166235 | gnomAD-4.0.0 | 4.77599E-06 | None | None | None | None | N | None | 0 | 6.85965E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2239 | likely_benign | 0.2394 | benign | -0.732 | Destabilizing | 0.584 | D | 0.395 | neutral | None | None | None | None | N |
Q/C | 0.5397 | ambiguous | 0.5799 | pathogenic | -0.145 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
Q/D | 0.3711 | ambiguous | 0.361 | ambiguous | -0.751 | Destabilizing | 0.872 | D | 0.455 | neutral | None | None | None | None | N |
Q/E | 0.0795 | likely_benign | 0.0795 | benign | -0.541 | Destabilizing | 0.679 | D | 0.361 | neutral | N | 0.380471069 | None | None | N |
Q/F | 0.7411 | likely_pathogenic | 0.7997 | pathogenic | -0.108 | Destabilizing | 0.773 | D | 0.597 | neutral | None | None | None | None | N |
Q/G | 0.1844 | likely_benign | 0.1898 | benign | -1.168 | Destabilizing | 0.737 | D | 0.487 | neutral | None | None | None | None | N |
Q/H | 0.1794 | likely_benign | 0.1823 | benign | -0.714 | Destabilizing | 0.007 | N | 0.155 | neutral | N | 0.397056675 | None | None | N |
Q/I | 0.7453 | likely_pathogenic | 0.7748 | pathogenic | 0.434 | Stabilizing | 0.932 | D | 0.658 | neutral | None | None | None | None | N |
Q/K | 0.2736 | likely_benign | 0.2456 | benign | -0.258 | Destabilizing | 0.679 | D | 0.426 | neutral | N | 0.414082211 | None | None | N |
Q/L | 0.2271 | likely_benign | 0.2488 | benign | 0.434 | Stabilizing | 0.679 | D | 0.507 | neutral | N | 0.464204387 | None | None | N |
Q/M | 0.4559 | ambiguous | 0.5163 | ambiguous | 0.622 | Stabilizing | 0.993 | D | 0.524 | neutral | None | None | None | None | N |
Q/N | 0.2133 | likely_benign | 0.2401 | benign | -0.971 | Destabilizing | 0.872 | D | 0.455 | neutral | None | None | None | None | N |
Q/P | 0.8882 | likely_pathogenic | 0.8564 | pathogenic | 0.075 | Stabilizing | 0.912 | D | 0.623 | neutral | N | 0.512766338 | None | None | N |
Q/R | 0.2202 | likely_benign | 0.2014 | benign | -0.347 | Destabilizing | 0.837 | D | 0.447 | neutral | N | 0.429147664 | None | None | N |
Q/S | 0.1569 | likely_benign | 0.1716 | benign | -1.207 | Destabilizing | 0.1 | N | 0.161 | neutral | None | None | None | None | N |
Q/T | 0.2657 | likely_benign | 0.2803 | benign | -0.789 | Destabilizing | 0.773 | D | 0.514 | neutral | None | None | None | None | N |
Q/V | 0.5367 | ambiguous | 0.5632 | ambiguous | 0.075 | Stabilizing | 0.872 | D | 0.579 | neutral | None | None | None | None | N |
Q/W | 0.6661 | likely_pathogenic | 0.6807 | pathogenic | -0.009 | Destabilizing | 0.995 | D | 0.574 | neutral | None | None | None | None | N |
Q/Y | 0.4088 | ambiguous | 0.4431 | ambiguous | 0.282 | Stabilizing | 0.037 | N | 0.229 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.