Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25734 | 77425;77426;77427 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
N2AB | 24093 | 72502;72503;72504 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
N2A | 23166 | 69721;69722;69723 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
N2B | 16669 | 50230;50231;50232 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
Novex-1 | 16794 | 50605;50606;50607 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
Novex-2 | 16861 | 50806;50807;50808 | chr2:178568932;178568931;178568930 | chr2:179433659;179433658;179433657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.002 | N | 0.192 | 0.052 | 0.408853032482 | gnomAD-4.0.0 | 2.73739E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69874E-06 | 0 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2712 | likely_benign | 0.2338 | benign | -2.99 | Highly Destabilizing | 0.891 | D | 0.649 | neutral | None | None | None | None | N |
I/C | 0.6558 | likely_pathogenic | 0.6122 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
I/D | 0.7432 | likely_pathogenic | 0.6349 | pathogenic | -3.447 | Highly Destabilizing | 0.952 | D | 0.718 | prob.delet. | None | None | None | None | N |
I/E | 0.5993 | likely_pathogenic | 0.5411 | ambiguous | -3.256 | Highly Destabilizing | 0.142 | N | 0.593 | neutral | None | None | None | None | N |
I/F | 0.1942 | likely_benign | 0.1616 | benign | -1.764 | Destabilizing | 0.977 | D | 0.692 | prob.neutral | N | 0.518441516 | None | None | N |
I/G | 0.7379 | likely_pathogenic | 0.6734 | pathogenic | -3.471 | Highly Destabilizing | 0.988 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/H | 0.4756 | ambiguous | 0.4017 | ambiguous | -2.739 | Highly Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/K | 0.4927 | ambiguous | 0.4294 | ambiguous | -2.458 | Highly Destabilizing | 0.538 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/L | 0.1283 | likely_benign | 0.1081 | benign | -1.591 | Destabilizing | 0.074 | N | 0.427 | neutral | N | 0.482019356 | None | None | N |
I/M | 0.1105 | likely_benign | 0.0993 | benign | -1.573 | Destabilizing | 0.962 | D | 0.656 | neutral | N | 0.494081395 | None | None | N |
I/N | 0.3563 | ambiguous | 0.2633 | benign | -2.72 | Highly Destabilizing | 0.995 | D | 0.724 | prob.delet. | N | 0.465048454 | None | None | N |
I/P | 0.9843 | likely_pathogenic | 0.9746 | pathogenic | -2.042 | Highly Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/Q | 0.5012 | ambiguous | 0.4454 | ambiguous | -2.658 | Highly Destabilizing | 0.983 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/R | 0.3828 | ambiguous | 0.3256 | benign | -1.951 | Destabilizing | 0.982 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/S | 0.2851 | likely_benign | 0.2391 | benign | -3.341 | Highly Destabilizing | 0.968 | D | 0.681 | prob.neutral | N | 0.463287254 | None | None | N |
I/T | 0.122 | likely_benign | 0.1165 | benign | -3.033 | Highly Destabilizing | 0.9 | D | 0.684 | prob.neutral | N | 0.498911606 | None | None | N |
I/V | 0.0735 | likely_benign | 0.0706 | benign | -2.042 | Highly Destabilizing | 0.002 | N | 0.192 | neutral | N | 0.438999298 | None | None | N |
I/W | 0.7719 | likely_pathogenic | 0.7166 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/Y | 0.5498 | ambiguous | 0.4722 | ambiguous | -1.945 | Destabilizing | 0.929 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.