Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25741 | 77446;77447;77448 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
N2AB | 24100 | 72523;72524;72525 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
N2A | 23173 | 69742;69743;69744 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
N2B | 16676 | 50251;50252;50253 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
Novex-1 | 16801 | 50626;50627;50628 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
Novex-2 | 16868 | 50827;50828;50829 | chr2:178568911;178568910;178568909 | chr2:179433638;179433637;179433636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs756616171 | 0.781 | 0.065 | N | 0.309 | 0.127 | 0.214338557667 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Y | rs756616171 | 0.781 | 0.065 | N | 0.309 | 0.127 | 0.214338557667 | gnomAD-4.0.0 | 2.73763E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63865E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1195 | likely_benign | 0.1 | benign | 0.304 | Stabilizing | 0.004 | N | 0.31 | neutral | None | None | None | None | N |
H/C | 0.1552 | likely_benign | 0.1473 | benign | 0.356 | Stabilizing | 0.497 | N | 0.236 | neutral | None | None | None | None | N |
H/D | 0.0748 | likely_benign | 0.0643 | benign | -0.221 | Destabilizing | None | N | 0.155 | neutral | N | 0.313840645 | None | None | N |
H/E | 0.1571 | likely_benign | 0.1313 | benign | -0.233 | Destabilizing | 0.002 | N | 0.236 | neutral | None | None | None | None | N |
H/F | 0.2393 | likely_benign | 0.2247 | benign | 0.635 | Stabilizing | 0.22 | N | 0.288 | neutral | None | None | None | None | N |
H/G | 0.0737 | likely_benign | 0.0679 | benign | 0.135 | Stabilizing | None | N | 0.174 | neutral | None | None | None | None | N |
H/I | 0.2277 | likely_benign | 0.197 | benign | 0.703 | Stabilizing | 0.085 | N | 0.341 | neutral | None | None | None | None | N |
H/K | 0.1471 | likely_benign | 0.128 | benign | 0.246 | Stabilizing | 0.004 | N | 0.362 | neutral | None | None | None | None | N |
H/L | 0.0947 | likely_benign | 0.0898 | benign | 0.703 | Stabilizing | 0.014 | N | 0.286 | neutral | N | 0.390514705 | None | None | N |
H/M | 0.3157 | likely_benign | 0.2857 | benign | 0.428 | Stabilizing | 0.245 | N | 0.256 | neutral | None | None | None | None | N |
H/N | 0.0391 | likely_benign | 0.0347 | benign | 0.14 | Stabilizing | None | N | 0.128 | neutral | N | 0.348433222 | None | None | N |
H/P | 0.1528 | likely_benign | 0.1568 | benign | 0.59 | Stabilizing | 0.065 | N | 0.324 | neutral | N | 0.380529784 | None | None | N |
H/Q | 0.1049 | likely_benign | 0.0897 | benign | 0.162 | Stabilizing | None | N | 0.149 | neutral | N | 0.386684966 | None | None | N |
H/R | 0.0977 | likely_benign | 0.0891 | benign | -0.086 | Destabilizing | None | N | 0.137 | neutral | N | 0.378065482 | None | None | N |
H/S | 0.0909 | likely_benign | 0.0778 | benign | 0.203 | Stabilizing | 0.004 | N | 0.317 | neutral | None | None | None | None | N |
H/T | 0.1136 | likely_benign | 0.094 | benign | 0.273 | Stabilizing | 0.009 | N | 0.308 | neutral | None | None | None | None | N |
H/V | 0.1697 | likely_benign | 0.1477 | benign | 0.59 | Stabilizing | 0.018 | N | 0.275 | neutral | None | None | None | None | N |
H/W | 0.4039 | ambiguous | 0.3982 | ambiguous | 0.481 | Stabilizing | 0.788 | D | 0.255 | neutral | None | None | None | None | N |
H/Y | 0.0816 | likely_benign | 0.0766 | benign | 0.757 | Stabilizing | 0.065 | N | 0.309 | neutral | N | 0.423896559 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.