Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25743 | 77452;77453;77454 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
N2AB | 24102 | 72529;72530;72531 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
N2A | 23175 | 69748;69749;69750 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
N2B | 16678 | 50257;50258;50259 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
Novex-1 | 16803 | 50632;50633;50634 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
Novex-2 | 16870 | 50833;50834;50835 | chr2:178568905;178568904;178568903 | chr2:179433632;179433631;179433630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs765997807 | 0.665 | 0.22 | N | 0.56 | 0.214 | 0.273070737957 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs765997807 | 0.665 | 0.22 | N | 0.56 | 0.214 | 0.273070737957 | gnomAD-4.0.0 | 2.73771E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5208E-05 | None | 0 | 0 | 1.79923E-06 | 0 | 1.65695E-05 |
E/Q | None | None | 0.22 | N | 0.541 | 0.152 | 0.265929055128 | gnomAD-4.0.0 | 6.84428E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99614E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1892 | likely_benign | 0.175 | benign | 0.005 | Stabilizing | 0.22 | N | 0.572 | neutral | N | 0.50786195 | None | None | N |
E/C | 0.8505 | likely_pathogenic | 0.8475 | pathogenic | -0.219 | Destabilizing | 0.968 | D | 0.667 | neutral | None | None | None | None | N |
E/D | 0.0777 | likely_benign | 0.0751 | benign | -0.39 | Destabilizing | None | N | 0.252 | neutral | N | 0.417338733 | None | None | N |
E/F | 0.8109 | likely_pathogenic | 0.8003 | pathogenic | -0.089 | Destabilizing | 0.89 | D | 0.618 | neutral | None | None | None | None | N |
E/G | 0.1243 | likely_benign | 0.1228 | benign | -0.081 | Destabilizing | 0.22 | N | 0.536 | neutral | N | 0.454814112 | None | None | N |
E/H | 0.5013 | ambiguous | 0.4644 | ambiguous | 0.534 | Stabilizing | 0.726 | D | 0.613 | neutral | None | None | None | None | N |
E/I | 0.4513 | ambiguous | 0.4353 | ambiguous | 0.172 | Stabilizing | 0.726 | D | 0.618 | neutral | None | None | None | None | N |
E/K | 0.1786 | likely_benign | 0.1717 | benign | 0.365 | Stabilizing | 0.22 | N | 0.56 | neutral | N | 0.488929473 | None | None | N |
E/L | 0.4262 | ambiguous | 0.416 | ambiguous | 0.172 | Stabilizing | 0.567 | D | 0.604 | neutral | None | None | None | None | N |
E/M | 0.5208 | ambiguous | 0.5145 | ambiguous | -0.043 | Destabilizing | 0.968 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.1953 | likely_benign | 0.1813 | benign | 0.168 | Stabilizing | 0.157 | N | 0.576 | neutral | None | None | None | None | N |
E/P | 0.402 | ambiguous | 0.3819 | ambiguous | 0.133 | Stabilizing | 0.726 | D | 0.591 | neutral | None | None | None | None | N |
E/Q | 0.1683 | likely_benign | 0.1561 | benign | 0.164 | Stabilizing | 0.22 | N | 0.541 | neutral | N | 0.488409398 | None | None | N |
E/R | 0.3186 | likely_benign | 0.3072 | benign | 0.558 | Stabilizing | 0.567 | D | 0.597 | neutral | None | None | None | None | N |
E/S | 0.1753 | likely_benign | 0.1647 | benign | 0.035 | Stabilizing | 0.157 | N | 0.565 | neutral | None | None | None | None | N |
E/T | 0.2302 | likely_benign | 0.2148 | benign | 0.116 | Stabilizing | 0.272 | N | 0.543 | neutral | None | None | None | None | N |
E/V | 0.2768 | likely_benign | 0.2672 | benign | 0.133 | Stabilizing | 0.667 | D | 0.561 | neutral | N | 0.514499921 | None | None | N |
E/W | 0.8973 | likely_pathogenic | 0.8967 | pathogenic | -0.072 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Y | 0.678 | likely_pathogenic | 0.6657 | pathogenic | 0.122 | Stabilizing | 0.89 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.