Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25747 | 77464;77465;77466 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
N2AB | 24106 | 72541;72542;72543 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
N2A | 23179 | 69760;69761;69762 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
N2B | 16682 | 50269;50270;50271 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
Novex-1 | 16807 | 50644;50645;50646 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
Novex-2 | 16874 | 50845;50846;50847 | chr2:178568893;178568892;178568891 | chr2:179433620;179433619;179433618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs762636595 | 0.289 | 0.491 | N | 0.457 | 0.152 | 0.184867976434 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs762636595 | 0.289 | 0.491 | N | 0.457 | 0.152 | 0.184867976434 | gnomAD-4.0.0 | 2.05334E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 1.15974E-05 | 0 |
E/V | None | None | 0.005 | N | 0.274 | 0.223 | 0.315609569513 | gnomAD-4.0.0 | 6.84445E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99617E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1829 | likely_benign | 0.1674 | benign | -0.629 | Destabilizing | 0.285 | N | 0.511 | neutral | N | 0.440735668 | None | None | N |
E/C | 0.874 | likely_pathogenic | 0.8536 | pathogenic | -0.112 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | N |
E/D | 0.2406 | likely_benign | 0.196 | benign | -0.684 | Destabilizing | 0.003 | N | 0.19 | neutral | N | 0.443602615 | None | None | N |
E/F | 0.829 | likely_pathogenic | 0.7842 | pathogenic | -0.473 | Destabilizing | 0.818 | D | 0.565 | neutral | None | None | None | None | N |
E/G | 0.3798 | ambiguous | 0.3275 | benign | -0.88 | Destabilizing | 0.491 | N | 0.548 | neutral | N | 0.480216776 | None | None | N |
E/H | 0.6704 | likely_pathogenic | 0.6026 | pathogenic | -0.497 | Destabilizing | 0.009 | N | 0.277 | neutral | None | None | None | None | N |
E/I | 0.3122 | likely_benign | 0.2905 | benign | 0.016 | Stabilizing | 0.209 | N | 0.536 | neutral | None | None | None | None | N |
E/K | 0.3527 | ambiguous | 0.3027 | benign | 0.026 | Stabilizing | 0.491 | N | 0.422 | neutral | N | 0.427094367 | None | None | N |
E/L | 0.4445 | ambiguous | 0.4006 | ambiguous | 0.016 | Stabilizing | 0.002 | N | 0.347 | neutral | None | None | None | None | N |
E/M | 0.5253 | ambiguous | 0.4798 | ambiguous | 0.316 | Stabilizing | 0.818 | D | 0.56 | neutral | None | None | None | None | N |
E/N | 0.4594 | ambiguous | 0.3808 | ambiguous | -0.31 | Destabilizing | 0.39 | N | 0.473 | neutral | None | None | None | None | N |
E/P | 0.4875 | ambiguous | 0.4073 | ambiguous | -0.179 | Destabilizing | 0.901 | D | 0.596 | neutral | None | None | None | None | N |
E/Q | 0.2121 | likely_benign | 0.1942 | benign | -0.276 | Destabilizing | 0.491 | N | 0.457 | neutral | N | 0.409412684 | None | None | N |
E/R | 0.504 | ambiguous | 0.459 | ambiguous | 0.214 | Stabilizing | 0.818 | D | 0.491 | neutral | None | None | None | None | N |
E/S | 0.3019 | likely_benign | 0.2619 | benign | -0.509 | Destabilizing | 0.561 | D | 0.42 | neutral | None | None | None | None | N |
E/T | 0.2472 | likely_benign | 0.2295 | benign | -0.308 | Destabilizing | 0.561 | D | 0.528 | neutral | None | None | None | None | N |
E/V | 0.1786 | likely_benign | 0.1728 | benign | -0.179 | Destabilizing | 0.005 | N | 0.274 | neutral | N | 0.398099612 | None | None | N |
E/W | 0.9606 | likely_pathogenic | 0.9481 | pathogenic | -0.288 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
E/Y | 0.7687 | likely_pathogenic | 0.7092 | pathogenic | -0.221 | Destabilizing | 0.692 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.