Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25749 | 77470;77471;77472 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
N2AB | 24108 | 72547;72548;72549 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
N2A | 23181 | 69766;69767;69768 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
N2B | 16684 | 50275;50276;50277 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
Novex-1 | 16809 | 50650;50651;50652 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
Novex-2 | 16876 | 50851;50852;50853 | chr2:178568887;178568886;178568885 | chr2:179433614;179433613;179433612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.524 | N | 0.419 | 0.18 | 0.26169431596 | gnomAD-4.0.0 | 1.59288E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89408E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4128 | ambiguous | 0.4046 | ambiguous | -0.836 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
A/D | 0.6027 | likely_pathogenic | 0.5663 | pathogenic | -1.423 | Destabilizing | 0.989 | D | 0.679 | prob.neutral | N | 0.504106782 | None | None | N |
A/E | 0.4755 | ambiguous | 0.4457 | ambiguous | -1.427 | Destabilizing | 0.994 | D | 0.664 | neutral | None | None | None | None | N |
A/F | 0.484 | ambiguous | 0.453 | ambiguous | -0.966 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/G | 0.2126 | likely_benign | 0.1975 | benign | -1.229 | Destabilizing | 0.008 | N | 0.474 | neutral | N | 0.46087608 | None | None | N |
A/H | 0.6333 | likely_pathogenic | 0.6116 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/I | 0.3047 | likely_benign | 0.2767 | benign | -0.305 | Destabilizing | 0.995 | D | 0.652 | neutral | None | None | None | None | N |
A/K | 0.6711 | likely_pathogenic | 0.6428 | pathogenic | -1.384 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
A/L | 0.2261 | likely_benign | 0.2106 | benign | -0.305 | Destabilizing | 0.984 | D | 0.522 | neutral | None | None | None | None | N |
A/M | 0.2629 | likely_benign | 0.2465 | benign | -0.216 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/N | 0.4256 | ambiguous | 0.4015 | ambiguous | -1.129 | Destabilizing | 0.933 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/P | 0.9422 | likely_pathogenic | 0.9272 | pathogenic | -0.476 | Destabilizing | 0.994 | D | 0.702 | prob.neutral | N | 0.471266653 | None | None | N |
A/Q | 0.4412 | ambiguous | 0.4215 | ambiguous | -1.244 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/R | 0.6046 | likely_pathogenic | 0.587 | pathogenic | -1.05 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/S | 0.1096 | likely_benign | 0.1035 | benign | -1.447 | Destabilizing | 0.484 | N | 0.523 | neutral | N | 0.471127572 | None | None | N |
A/T | 0.0821 | likely_benign | 0.08 | benign | -1.358 | Destabilizing | 0.34 | N | 0.415 | neutral | N | 0.453907248 | None | None | N |
A/V | 0.1506 | likely_benign | 0.1404 | benign | -0.476 | Destabilizing | 0.524 | D | 0.419 | neutral | N | 0.487657249 | None | None | N |
A/W | 0.8997 | likely_pathogenic | 0.8893 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/Y | 0.6692 | likely_pathogenic | 0.6375 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.