Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25754 | 77485;77486;77487 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
N2AB | 24113 | 72562;72563;72564 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
N2A | 23186 | 69781;69782;69783 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
N2B | 16689 | 50290;50291;50292 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
Novex-1 | 16814 | 50665;50666;50667 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
Novex-2 | 16881 | 50866;50867;50868 | chr2:178568872;178568871;178568870 | chr2:179433599;179433598;179433597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1369560200 | -0.739 | 0.998 | N | 0.801 | 0.443 | 0.801626560535 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
L/P | rs1369560200 | -0.739 | 0.998 | N | 0.801 | 0.443 | 0.801626560535 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs1369560200 | -0.739 | 0.998 | N | 0.801 | 0.443 | 0.801626560535 | gnomAD-4.0.0 | 6.57557E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2968 | likely_benign | 0.3325 | benign | -1.558 | Destabilizing | 0.938 | D | 0.537 | neutral | None | None | None | None | N |
L/C | 0.441 | ambiguous | 0.4649 | ambiguous | -0.949 | Destabilizing | 0.334 | N | 0.388 | neutral | None | None | None | None | N |
L/D | 0.7758 | likely_pathogenic | 0.8066 | pathogenic | -0.868 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
L/E | 0.4794 | ambiguous | 0.5109 | ambiguous | -0.725 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
L/F | 0.2605 | likely_benign | 0.2968 | benign | -0.821 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | N | 0.472293837 | None | None | N |
L/G | 0.5188 | ambiguous | 0.5495 | ambiguous | -1.997 | Destabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
L/H | 0.3768 | ambiguous | 0.4238 | ambiguous | -1.172 | Destabilizing | 0.999 | D | 0.796 | deleterious | N | 0.47579933 | None | None | N |
L/I | 0.1974 | likely_benign | 0.2141 | benign | -0.363 | Destabilizing | 0.958 | D | 0.443 | neutral | N | 0.473014626 | None | None | N |
L/K | 0.4037 | ambiguous | 0.4313 | ambiguous | -0.895 | Destabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | N |
L/M | 0.1258 | likely_benign | 0.1303 | benign | -0.409 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/N | 0.3266 | likely_benign | 0.3513 | ambiguous | -1.071 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
L/P | 0.2082 | likely_benign | 0.2505 | benign | -0.734 | Destabilizing | 0.998 | D | 0.801 | deleterious | N | 0.483790225 | None | None | N |
L/Q | 0.1901 | likely_benign | 0.2085 | benign | -1.003 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
L/R | 0.3277 | likely_benign | 0.3547 | ambiguous | -0.614 | Destabilizing | 0.998 | D | 0.783 | deleterious | N | 0.507224445 | None | None | N |
L/S | 0.3012 | likely_benign | 0.3384 | benign | -1.805 | Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/T | 0.1458 | likely_benign | 0.1558 | benign | -1.515 | Destabilizing | 0.991 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/V | 0.1394 | likely_benign | 0.1511 | benign | -0.734 | Destabilizing | 0.958 | D | 0.473 | neutral | N | 0.517364081 | None | None | N |
L/W | 0.5225 | ambiguous | 0.5765 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/Y | 0.5352 | ambiguous | 0.5808 | pathogenic | -0.692 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.