Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25758 | 77497;77498;77499 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
N2AB | 24117 | 72574;72575;72576 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
N2A | 23190 | 69793;69794;69795 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
N2B | 16693 | 50302;50303;50304 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
Novex-1 | 16818 | 50677;50678;50679 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
Novex-2 | 16885 | 50878;50879;50880 | chr2:178568860;178568859;178568858 | chr2:179433587;179433586;179433585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.002 | N | 0.2 | 0.071 | 0.345175991111 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8913 | likely_pathogenic | 0.862 | pathogenic | -2.369 | Highly Destabilizing | 0.963 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/C | 0.9184 | likely_pathogenic | 0.8885 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
I/D | 0.9967 | likely_pathogenic | 0.9956 | pathogenic | -1.942 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
I/E | 0.989 | likely_pathogenic | 0.9863 | pathogenic | -1.766 | Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | N |
I/F | 0.5748 | likely_pathogenic | 0.4923 | ambiguous | -1.441 | Destabilizing | 0.102 | N | 0.437 | neutral | N | 0.488347404 | None | None | N |
I/G | 0.9854 | likely_pathogenic | 0.9819 | pathogenic | -2.881 | Highly Destabilizing | 0.997 | D | 0.831 | deleterious | None | None | None | None | N |
I/H | 0.9812 | likely_pathogenic | 0.975 | pathogenic | -2.109 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
I/K | 0.9788 | likely_pathogenic | 0.9723 | pathogenic | -1.782 | Destabilizing | 0.917 | D | 0.845 | deleterious | None | None | None | None | N |
I/L | 0.2993 | likely_benign | 0.2558 | benign | -0.928 | Destabilizing | 0.095 | N | 0.499 | neutral | N | 0.462545374 | None | None | N |
I/M | 0.3497 | ambiguous | 0.2998 | benign | -0.866 | Destabilizing | 0.971 | D | 0.705 | prob.neutral | N | 0.497238628 | None | None | N |
I/N | 0.9538 | likely_pathogenic | 0.9464 | pathogenic | -1.944 | Destabilizing | 0.999 | D | 0.832 | deleterious | N | 0.512722764 | None | None | N |
I/P | 0.9873 | likely_pathogenic | 0.9844 | pathogenic | -1.384 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9762 | likely_pathogenic | 0.9696 | pathogenic | -1.861 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
I/R | 0.9694 | likely_pathogenic | 0.9612 | pathogenic | -1.437 | Destabilizing | 0.993 | D | 0.832 | deleterious | None | None | None | None | N |
I/S | 0.9425 | likely_pathogenic | 0.931 | pathogenic | -2.73 | Highly Destabilizing | 0.996 | D | 0.807 | deleterious | D | 0.52357209 | None | None | N |
I/T | 0.8928 | likely_pathogenic | 0.8723 | pathogenic | -2.394 | Highly Destabilizing | 0.922 | D | 0.781 | deleterious | N | 0.487781654 | None | None | N |
I/V | 0.0896 | likely_benign | 0.0879 | benign | -1.384 | Destabilizing | 0.002 | N | 0.2 | neutral | N | 0.39940076 | None | None | N |
I/W | 0.9882 | likely_pathogenic | 0.9819 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/Y | 0.9458 | likely_pathogenic | 0.9277 | pathogenic | -1.395 | Destabilizing | 0.811 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.