Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25763 | 77512;77513;77514 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
N2AB | 24122 | 72589;72590;72591 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
N2A | 23195 | 69808;69809;69810 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
N2B | 16698 | 50317;50318;50319 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
Novex-1 | 16823 | 50692;50693;50694 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
Novex-2 | 16890 | 50893;50894;50895 | chr2:178568845;178568844;178568843 | chr2:179433572;179433571;179433570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.09 | N | 0.112 | 0.132 | 0.158396225186 | gnomAD-4.0.0 | 1.5929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89415E-05 | 0 | 0 | 0 | 0 |
Q/P | None | None | 0.997 | N | 0.418 | 0.424 | 0.230578612272 | gnomAD-4.0.0 | 2.73845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69941E-06 | 0 | 1.65733E-05 |
Q/R | None | None | 0.852 | N | 0.463 | 0.239 | 0.193865811164 | gnomAD-4.0.0 | 6.84584E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99756E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1222 | likely_benign | 0.1095 | benign | -0.312 | Destabilizing | 0.983 | D | 0.411 | neutral | None | None | None | None | N |
Q/C | 0.7158 | likely_pathogenic | 0.6753 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
Q/D | 0.4886 | ambiguous | 0.4301 | ambiguous | -0.196 | Destabilizing | 0.973 | D | 0.433 | neutral | None | None | None | None | N |
Q/E | 0.0745 | likely_benign | 0.0706 | benign | -0.218 | Destabilizing | 0.883 | D | 0.505 | neutral | N | 0.383375302 | None | None | N |
Q/F | 0.7614 | likely_pathogenic | 0.7169 | pathogenic | -0.435 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
Q/G | 0.2954 | likely_benign | 0.2602 | benign | -0.53 | Destabilizing | 0.992 | D | 0.479 | neutral | None | None | None | None | N |
Q/H | 0.2869 | likely_benign | 0.2569 | benign | -0.508 | Destabilizing | 0.997 | D | 0.407 | neutral | N | 0.48636917 | None | None | N |
Q/I | 0.3854 | ambiguous | 0.353 | ambiguous | 0.183 | Stabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
Q/K | 0.114 | likely_benign | 0.1096 | benign | -0.028 | Destabilizing | 0.09 | N | 0.112 | neutral | N | 0.44546391 | None | None | N |
Q/L | 0.1749 | likely_benign | 0.1601 | benign | 0.183 | Stabilizing | 0.973 | D | 0.479 | neutral | N | 0.492391066 | None | None | N |
Q/M | 0.356 | ambiguous | 0.3286 | benign | 0.596 | Stabilizing | 0.998 | D | 0.405 | neutral | None | None | None | None | N |
Q/N | 0.3583 | ambiguous | 0.326 | benign | -0.299 | Destabilizing | 0.973 | D | 0.441 | neutral | None | None | None | None | N |
Q/P | 0.0928 | likely_benign | 0.083 | benign | 0.047 | Stabilizing | 0.997 | D | 0.418 | neutral | N | 0.350942304 | None | None | N |
Q/R | 0.1341 | likely_benign | 0.129 | benign | 0.141 | Stabilizing | 0.852 | D | 0.463 | neutral | N | 0.467436693 | None | None | N |
Q/S | 0.2105 | likely_benign | 0.1897 | benign | -0.312 | Destabilizing | 0.983 | D | 0.419 | neutral | None | None | None | None | N |
Q/T | 0.188 | likely_benign | 0.1653 | benign | -0.177 | Destabilizing | 0.821 | D | 0.445 | neutral | None | None | None | None | N |
Q/V | 0.2109 | likely_benign | 0.1918 | benign | 0.047 | Stabilizing | 0.98 | D | 0.455 | neutral | None | None | None | None | N |
Q/W | 0.7034 | likely_pathogenic | 0.6604 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
Q/Y | 0.5809 | likely_pathogenic | 0.534 | ambiguous | -0.142 | Destabilizing | 0.999 | D | 0.426 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.