Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25770 | 77533;77534;77535 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
N2AB | 24129 | 72610;72611;72612 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
N2A | 23202 | 69829;69830;69831 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
N2B | 16705 | 50338;50339;50340 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
Novex-1 | 16830 | 50713;50714;50715 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
Novex-2 | 16897 | 50914;50915;50916 | chr2:178568824;178568823;178568822 | chr2:179433551;179433550;179433549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.999 | N | 0.569 | 0.517 | 0.491729458163 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.965 | likely_pathogenic | 0.9524 | pathogenic | -1.725 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
R/C | 0.5513 | ambiguous | 0.5095 | ambiguous | -1.642 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
R/D | 0.9961 | likely_pathogenic | 0.9948 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
R/E | 0.9417 | likely_pathogenic | 0.9224 | pathogenic | -0.62 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | N |
R/F | 0.9892 | likely_pathogenic | 0.9863 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
R/G | 0.9583 | likely_pathogenic | 0.9392 | pathogenic | -2.065 | Highly Destabilizing | 0.999 | D | 0.594 | neutral | D | 0.55332582 | None | None | N |
R/H | 0.3639 | ambiguous | 0.3463 | ambiguous | -1.93 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
R/I | 0.952 | likely_pathogenic | 0.9461 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.51234437 | None | None | N |
R/K | 0.4885 | ambiguous | 0.4319 | ambiguous | -1.148 | Destabilizing | 0.533 | D | 0.322 | neutral | N | 0.488982968 | None | None | N |
R/L | 0.919 | likely_pathogenic | 0.9048 | pathogenic | -0.744 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
R/M | 0.9491 | likely_pathogenic | 0.9272 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
R/N | 0.9803 | likely_pathogenic | 0.9744 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.541 | neutral | None | None | None | None | N |
R/P | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
R/Q | 0.3205 | likely_benign | 0.2657 | benign | -0.969 | Destabilizing | 1.0 | D | 0.536 | neutral | None | None | None | None | N |
R/S | 0.9658 | likely_pathogenic | 0.9527 | pathogenic | -1.953 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.503453146 | None | None | N |
R/T | 0.9501 | likely_pathogenic | 0.9247 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.584 | neutral | N | 0.495326071 | None | None | N |
R/V | 0.9539 | likely_pathogenic | 0.9435 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
R/W | 0.8218 | likely_pathogenic | 0.7973 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
R/Y | 0.9519 | likely_pathogenic | 0.9426 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.